Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 617 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  330 bits (845), Expect = 1e-94
 Identities = 211/592 (35%), Positives = 311/592 (52%), Gaps = 43/592 (7%)

Query: 38  DTAMAVLEEAGKVTARTIAPLSRAADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGG 97
           +T  AVL+   ++     AP +R  D +  H+D   V  P    +A+  + E G +    
Sbjct: 32  ETFDAVLDICERIAREKYAPFNRTVDTQEPHFDGEKVILPQATHDAHKAFVESGMMSAAQ 91

Query: 98  DPLFGGMGMPKAISAQVEEMVNASSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYA 157
           D   GGM +P  + A        +S++ G   MLT+G    +  H ++  K  +  N ++
Sbjct: 92  DYDIGGMQLPYTMQAAANSFFAMASVSIGSN-MLTSGNANLLMVHGTDMQKNVFAKNEFS 150

Query: 158 GVWAGSMCLTEPHAGTDLGIIRTKAEPQADG--------SYKVSGTKIFITGGEHDLTEN 209
           G WAG+MCL+EP AG+ L  + T+A P  +G         Y+++G K++I+ G+H+LTEN
Sbjct: 151 GRWAGTMCLSEPQAGSSLSDVATRAVPDGEGFQDDPLGPRYRLTGNKMWISAGDHELTEN 210

Query: 210 IIHLVLAKLPDAPA----GPKGISLFLVPKFLVNEDGSL-GARNPATCGSIEHKMGIQAS 264
           I+H+VLAK+PD       G +GISLF+VPK +V+  G L G RN      + HK+G + +
Sbjct: 211 IVHIVLAKIPDENGKLVPGTRGISLFIVPKRMVDTKGKLTGQRNDVALAGLNHKLGWRGT 270

Query: 265 ATCVMNFDE----------AVGYIVGEPNKGLAAMFTMMNYERLGVGIQGLASAERSYQN 314
              ++NF E          AVGY+VGEP KGL  MF MMN  R+GVG          Y  
Sbjct: 271 TNTLLNFGEGKYPVDGKAGAVGYLVGEPGKGLHCMFHMMNEARIGVGTAATMLGMAGYHA 330

Query: 315 AVEYARDRLQSRAPAGPQA------KDKAADP--IIVHPDVRRMLLTMKALIEGGRAFST 366
           ++EYA+ R Q R    PQA      KD AA    II H DVRRMLL  KA  EG  A   
Sbjct: 331 SLEYAKTRPQGRLVKKPQAAGTAVAKDSAAPQVRIIEHADVRRMLLAQKAYCEGALALEL 390

Query: 367 YVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGHGYIREW 426
           Y A  +D  K + DA     +  L+ +LTP+AK++ ++  LE      QV GG+GY R++
Sbjct: 391 YCARLVDEQK-TGDAQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDF 449

Query: 427 GQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFITGAGS--ELD 484
             EQ  RD R+  I+EGT+GIQA DL+GRKV+   G   +L +  +   I  A     L 
Sbjct: 450 PVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLMEKGRGLQLLAGRMTATIASAAKVPALA 509

Query: 485 EFAKPLGASLDQLDGLTE--WVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWALMARAA 542
             AK LGA+L ++   TE  W      G+P +  A +V Y+ AFG+    ++W  +AR A
Sbjct: 510 AHAKALGAALQRIGSATEAAWF----TGDPADALANAVPYMQAFGHTVLAWIWLDVARRA 565

Query: 543 LAGEGD--APFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592
           L  +G+      +GK+G   ++F   LP++ + +  V+    +   L  + F
Sbjct: 566 LEKDGEKARAVTAGKIGATDYFFHYELPKIGAWLNVVETRDPTCTALPEDAF 617