Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 573 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

 Score =  462 bits (1189), Expect = e-134
 Identities = 266/598 (44%), Positives = 368/598 (61%), Gaps = 38/598 (6%)

Query: 4   YKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSRAAD 63
           ++ PL +  FVL  + N+ E    LP        +   AVL+E+ K+  +  APL++  D
Sbjct: 3   FRVPLVEQLFVLETIANI-EGIASLPAFTAATP-ELIEAVLDESAKLAEQVFAPLNKIGD 60

Query: 64  EEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNASSL 123
            EG  W NG V  P G+  A+  Y  GGW  +G DP +GG G+P  ++  V+E + A+++
Sbjct: 61  IEGSVWRNGEVSLPDGYASAFRQYVAGGWGSLGSDPRWGGQGLPFVLALAVQEQLTAANM 120

Query: 124 AFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRTKAE 183
           AF L  MLT GA  ++ +HAS+ L   YL  + +G W G+M LTEP AG+D+G +RT+AE
Sbjct: 121 AFALNMMLTLGAIEALQSHASDDLNALYLTKLVSGEWTGTMNLTEPQAGSDVGALRTRAE 180

Query: 184 PQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGS 243
           P ADG++++ G+KIFIT GEHDL ENI+HLVLA+ P +PAG KGISLFLVPKFL  ED  
Sbjct: 181 PAADGTWRIKGSKIFITWGEHDLAENIVHLVLARTPGSPAGTKGISLFLVPKFL--ED-- 236

Query: 244 LGARNPATCGSIEHKMGIQASATCVMNFDEA---VGYIVGEPNKGLAAMFTMMNYERLGV 300
            G RN   C SIEHK+GI AS TC M+F +A   VGY+VG  N G+ AMFTMMN+ R+ V
Sbjct: 237 -GVRNDLRCVSIEHKLGIHASPTCTMSFGDADGCVGYMVGAENGGMRAMFTMMNHARINV 295

Query: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMKALIEG 360
           G+QG+  AER+YQ A+ YAR+R+Q                II +PDVRRM+LTM+A  E 
Sbjct: 296 GLQGVGIAERAYQAALGYARERVQGLR-------------IIDYPDVRRMILTMRATTEA 342

Query: 361 GRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGH 420
            RA + + A  +D   +S DA    +++ L  LLTPV KA+ TD+G+E A  G QVFGG 
Sbjct: 343 IRALAYFNAAAVDRG-HSGDA----QAQMLADLLTPVTKAYATDMGVEVASLGIQVFGGM 397

Query: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQF-ITGA 479
           G+I E G  Q  RD RI  IYEGTNGIQA+DL+GRK+    G +  LF++   +  + GA
Sbjct: 398 GFIEETGAAQHFRDARIAPIYEGTNGIQAMDLVGRKL--RQGRWEALFAEIATEIDLAGA 455

Query: 480 GSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWALMA 539
             E      PL A+L  L   T+W+L Q+  +  ++ A +  YL  FG +  GY+ A  A
Sbjct: 456 TPETAALQAPLEAALSALTHATKWMLDQS--DAQDVTAGASPYLRMFGILMGGYLLARQA 513

Query: 540 RAA---LAG--EGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592
           R A   +AG    + PF   K+ TA F+  ++LP+  +L+++  AG+  LY +  +QF
Sbjct: 514 RIACERIAGGTADNLPFLRTKIATASFFITQILPQAGALLSAATAGAAPLYAISEDQF 571