Pairwise Alignments

Query, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 598 a.a., Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) from Variovorax sp. SCN45

 Score =  655 bits (1691), Expect = 0.0
 Identities = 325/595 (54%), Positives = 422/595 (70%), Gaps = 3/595 (0%)

Query: 1   MPDYKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRV 60
           MP Y  P+RD++FV  E+L      ++LP   +   D ++A++EE  KF  +V  PLN  
Sbjct: 1   MPTYNPPVRDMQFVLHEVLNVTEELKALPAHAETDADTINAVIEEAGKFAAEVTFPLNIS 60

Query: 61  GDQEGCTWSESG--VKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVG 118
           GD+EGCT  ++   VKTP GFK+AY ++VEGGWP+L+ D   GGQGLP  +   L EM+ 
Sbjct: 61  GDEEGCTLDKATHEVKTPKGFKDAYAKYVEGGWPALSCDPAFGGQGLPFVVNQCLFEMLN 120

Query: 119 GSNWSWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLR 178
            +N +W MYPGLSHGA   ++AHGT EQ+ TYL KL SGEWTGTMCLTEPHCGTDLG+LR
Sbjct: 121 SANQAWTMYPGLSHGAYEALAAHGTEEQKKTYLPKLTSGEWTGTMCLTEPHCGTDLGLLR 180

Query: 179 TKAEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPN 238
           TKAEPQADG+Y+++G+KIFISAGEHDM DNI+H+VLARLPDAP G+KGISLF+VPKF   
Sbjct: 181 TKAEPQADGTYRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVVPKFKVK 240

Query: 239 AEGGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLG 298
           A+G +GERN + C  +EHKMGIHGNAT  +  + ATG L+G  NKGL  MF  MN ARLG
Sbjct: 241 ADGSLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGTLVGEPNKGLAAMFVMMNAARLG 300

Query: 299 TALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAE 358
              Q L   EVA+Q  L YA++R+QMRSL+G KA DK ADPIIVHPDVR+MLLT KA+AE
Sbjct: 301 VGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYAE 360

Query: 359 GNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGG 418
           G RA+  F    +D      DE+ RK +  L+A LTPI KAF+T+ G  + N  +Q++GG
Sbjct: 361 GGRALQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHISTNACMQVFGG 420

Query: 419 HGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQ 478
           HGFI EWGMEQ VRD+RI+M+YEGT  IQ+LDLLGRKVL   G +LK F K+V K  + +
Sbjct: 421 HGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKFGKLVGKLVEEE 480

Query: 479 EGNEAVKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWAD 538
             NE + EF+ P+A +  +  + T ++G    ++ +EVGAA+VDYL  +G+    Y +A 
Sbjct: 481 GVNEKMAEFINPIAGLGDQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGHFVFGYLFAR 540

Query: 539 IARLAAEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMD 593
           +A++A  ++AAG + + FY AKLQTARFYF ++ P T T + T  +G+  LM  D
Sbjct: 541 MAQVALREIAAG-NNDPFYVAKLQTARFYFAKLFPETATLMRTARAGSKVLMDTD 594