Pairwise Alignments

Query, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 581 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  439 bits (1128), Expect = e-127
 Identities = 243/557 (43%), Positives = 329/557 (59%), Gaps = 15/557 (2%)

Query: 3   DYKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRVGD 62
           DY+    D+RF+ + +L       +L    +    +   +LEE  +F  +V++PLNR GD
Sbjct: 2   DYQPRPEDVRFLLNAVLDAPTRLAALAPFAEVDEALQSQVLEEAGRFVGEVIAPLNRGGD 61

Query: 63  QEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGSNW 122
           + GC ++   V +P GF+EAYQ FV+GGWP+L+   E GGQGLP  L   L E +  +N 
Sbjct: 62  ETGCRFAGGEVASPPGFREAYQAFVDGGWPALSAAPEDGGQGLPAVLEAVLYEWLAAANH 121

Query: 123 SWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTKAE 182
            + M PGL HGA   +  HG+ E +  YL+K+ +GEW  TMCLTE H G+DLG +RT+A 
Sbjct: 122 GFTMAPGLLHGAYACLKHHGSDELKQRYLSKIATGEWLATMCLTEAHAGSDLGQVRTRAV 181

Query: 183 PQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGG 242
           PQADGS +VSG KIFIS GEHD+  NIVH+VL RLPDAP G KG+SL +VPK LP+    
Sbjct: 182 PQADGSVRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPDGPKGLSLALVPKLLPD---- 237

Query: 243 VGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTALQ 302
            G RN V C  IE KMG+HG+ TC M FD ATG+L+G   +GL  MF  MN+ARL  ALQ
Sbjct: 238 -GARNAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGLAAMFVMMNSARLHVALQ 296

Query: 303 GLAHAEVAFQGGLKYARERLQMRSLTGPKAPDK---AADPIIVHPDVRRMLLTMKAFAEG 359
           G+   + A+Q    YA ER QMR+  GP    +   +AD I  HP VRR+L T +A+ +G
Sbjct: 297 GIGLLDAAWQKADAYAAERRQMRA-PGPVPASRGGESADLIAEHPAVRRILDTQRAWIDG 355

Query: 360 NRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGH 419
            RA+ Y +A  +D+  +  D + R++A    +F+TP+ KA  T+  F  A+  +Q++GGH
Sbjct: 356 ARALAYRSALMLDVAAHDADAKARERAQRWCSFVTPVLKAACTQQAFHGASECLQVFGGH 415

Query: 420 GFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQE 479
           G++ EWG+EQ VRDSR++M+YEGT  IQA+DLL RKVL   G  +      +     A  
Sbjct: 416 GYVREWGIEQIVRDSRVTMIYEGTNEIQAIDLLVRKVLPDGGAGMSAVLLELRDTLDA-- 473

Query: 480 GNEAVKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADI 539
             EA  +    LA +      L   V MAA  +       + DYL  +    LA+ WA I
Sbjct: 474 SREADADVQRRLAQLR----YLGTTVAMAAHANPALPYEVADDYLRVAMLTMLAWAWARI 529

Query: 540 ARLAAEKLAAGTSEEAF 556
              A    A      AF
Sbjct: 530 EAAAPRDAARARVAAAF 546