Pairwise Alignments

Query, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 554 a.a., acyl-CoA dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  374 bits (959), Expect = e-108
 Identities = 240/599 (40%), Positives = 325/599 (54%), Gaps = 49/599 (8%)

Query: 1   MPDYKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRV 60
           M DY+ PL D+ F     L + A    LP   D T    + +L   A   ++V++PL+ V
Sbjct: 1   MIDYRTPLPDLLFA----LRHGAGAARLPHWDDET---AETVLTHAAAMVDEVIAPLDPV 53

Query: 61  GDQEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGS 120
           GD EG    +  V  P  F +AY+QF   GW  LA   E GGQGLP  L  ALSEM+ G+
Sbjct: 54  GDIEGTKLVDGRVVMPQPFVDAYRQFAGDGWQGLAVPEEDGGQGLPHILASALSEMLSGA 113

Query: 121 NWSWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTK 180
             ++ M   L+HGAM T++A G+  Q+  ++ +L +GE   TMCLTE   G+DLG++RT 
Sbjct: 114 CITYQMVLSLAHGAMRTLAASGSEAQRAAWIPRLAAGEVLATMCLTEAQAGSDLGLVRTM 173

Query: 181 AEPQADGSYKVSGTKIFISAGEHDM-ADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNA 239
           A PQADGS+ +SG KIFIS G+ ++    I+H+VLAR PDAPAG KG+SLF+ P  L + 
Sbjct: 174 ASPQADGSWSISGGKIFISGGDQNLTGGQIMHLVLARTPDAPAGVKGLSLFLCPSHLED- 232

Query: 240 EGGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGT 299
               G RN +S   +E KMG+H + TC + FD A   +IG   +GL  MFT MN  RL  
Sbjct: 233 ----GSRNAISVVRLEEKMGMHASPTCQVAFDGARAEIIGAPGEGLARMFTMMNAERLDV 288

Query: 300 ALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEG 359
           A+QG+  AEVA Q  L YA ER Q     G    D   D I  H DVRRMLL   A A G
Sbjct: 289 AVQGVGLAEVALQRSLAYANERKQ-----GRAGKDGGPDFIAKHGDVRRMLLAQMALAMG 343

Query: 360 NRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGH 419
            RAMV  T   VD+        E     AL+  +TP+AKAF TE   EAA+H +Q++GG+
Sbjct: 344 CRAMVMRTL--VDL--------ELGDRPALMELMTPVAKAFATEAAMEAADHAIQVHGGY 393

Query: 420 GFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQE 479
           GF+ E+ +EQ +RD RI+ +YEGT GIQA  + GR + +  G AL  F   V      + 
Sbjct: 394 GFLREYRVEQILRDGRITRIYEGTNGIQAATVAGRVIRLDNGRALTEFKAEVE-----ES 448

Query: 480 GNEAVKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADI 539
              A   F   L      W E +     AAM  R ++G  +  YL  +G       W   
Sbjct: 449 MGLASPAFAGALGRALAAWDEAS-----AAMLGRRDIGLTATSYLRLTGLLAFGAAW--- 500

Query: 540 ARLAAEKLAAGTSEEAFYTAKLQTARFYFQR-ILPRTRTHVATMLSGANNLMAMDEEHF 597
           ARL A+      +E A   A+++    Y +  +LP TR H+A +   +  L ++ +  F
Sbjct: 501 ARLEAK------AEHAANPARIRAVAEYVRDWMLPETR-HLADLCRNSAELGSLPDGVF 552