Pairwise Alignments

Query, 243 a.a., putative Competence protein ComF from Pseudomonas putida KT2440

Subject, 241 a.a., Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy from Variovorax sp. SCN45

 Score =  124 bits (311), Expect = 2e-33
 Identities = 87/212 (41%), Positives = 109/212 (51%), Gaps = 9/212 (4%)

Query: 33  PLCITCEQALPWLGDQCRHCALPLPMAGLTCAPCGRCLPAFDQVIALWHFGFPVDTLISR 92
           P+C  C         +C  CALPLP     C  C    P  D  +A   + +P    I+ 
Sbjct: 34  PVCDACVARFAPPAARCGGCALPLPEGVTRCGECVAHPPPLDACLAACTYAWPWPDAIAA 93

Query: 93  FKHNRQWPLGRLMAELLGQGLQYRYAEGLPRPDLLLPVPLARRRLRERGFNQAGMLGRWL 152
           FK   +       A L+        A  L + DL+LP+PLA  RLRERGFNQA  L R L
Sbjct: 94  FKFRGEAGWAGPFAMLMRSAPWVEPA--LEQCDLVLPMPLAPGRLRERGFNQAHELARRL 151

Query: 153 SSHVGVTCNERLLARTRETPAQQHLGAKARRRNLRQAFAVQG----ELEGKHVAIVDDVL 208
           SS  G T +  LL RTRETPAQ  L    R RNLR AFAV+      + G+ + +VDDV+
Sbjct: 152 SS--GKT-DATLLLRTRETPAQSGLARAERLRNLRGAFAVEPLRAERIRGRRIVLVDDVM 208

Query: 209 TTGATAQAIAQALRKAGARRVDVYCLARTPKP 240
           T+GA+  A A+ LR AGA  +    LART  P
Sbjct: 209 TSGASLFAAAEPLRLAGAAHITAVVLARTDPP 240