Pairwise Alignments

Query, 243 a.a., putative Competence protein ComF from Pseudomonas putida KT2440

Subject, 263 a.a., competence protein F from Agrobacterium fabrum C58

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 77/236 (32%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 9   RLVYKCSLINQMCLLCDEPAEQHYPLCITCEQALPWLGDQ-CRHCALPLPMAGLTCAPCG 67
           RLVY  +     C  C+        LC  C + + ++    C    +P           G
Sbjct: 31  RLVYPPT-----CAGCNRMTGGEGALCPDCWRDVAFIDRPFCEVLGIPFARDHGEGVVSG 85

Query: 68  RCL---PAFDQVIALWHFGFPVDTLISRFKHNRQWPLGRLMAELLGQGLQYRYAEG-LPR 123
           R +   P FD++ ++         L+ R K+  +  L RL+A  +      R ++G +  
Sbjct: 86  RAIADPPPFDRLRSVASHEGTARKLVHRLKYQDRTDLARLIALWM-----LRASDGTVDA 140

Query: 124 PDLLLPVPLARRRLRERGFNQAGMLGRWLSSHVGVTCNERLLARTRETPAQQHLGAKARR 183
            D ++PVPL RRR   R FNQ+  L R L+   G       L R + T  Q  L A ARR
Sbjct: 141 CDCIVPVPLHRRRFLHRRFNQSAELARHLARAAGKPLLAGTLLRVKPTERQVGLSALARR 200

Query: 184 RNLRQAFAV----QGELEGKHVAIVDDVLTTGATAQAIAQALRKAGARRVDVYCLA 235
            N+R AF++    + ++ GK V +VDDV TTGAT  A ++ALRKAGA  V V   A
Sbjct: 201 DNVRGAFSLAPGREADIFGKRVVLVDDVYTTGATVGAASRALRKAGAVDVTVLTFA 256