Pairwise Alignments

Query, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 294 a.a., chloramphenical resistance permease RarD from Pseudomonas simiae WCS417

 Score =  518 bits (1333), Expect = e-152
 Identities = 248/294 (84%), Positives = 274/294 (93%)

Query: 1   MHAANPRRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHP 60
           M AANPR+GYILGLSAY+IWGLFPLYFKAI SVPA EIIVHRVLWSALFG LLL+VWKHP
Sbjct: 1   MQAANPRKGYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGGLLLMVWKHP 60

Query: 61  GWWRELRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120
           GW+RELR+NP+RL ILALSG+LIAGNWLTYVWSVN GRMLEASLGYYINPL+NV+LGMLI
Sbjct: 61  GWFRELRDNPKRLAILALSGSLIAGNWLTYVWSVNTGRMLEASLGYYINPLVNVVLGMLI 120

Query: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180
           LGERLRRLQW+AVG+AAVGVAQQVWQVGSLPWVSLVLAL+FGFYGLIRKQAPV ALPGLV
Sbjct: 121 LGERLRRLQWVAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180

Query: 181 VETWMLVPLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240
           VETWMLVP+A+ WLL +PTA SAQ AF+++SEA WL+AAGPVTL+PLVCFNAAARHLPYT
Sbjct: 181 VETWMLVPIAVAWLLFNPTAHSAQMAFWSTSEAWWLVAAGPVTLIPLVCFNAAARHLPYT 240

Query: 241 TLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNLRKR 294
            LGFLQY+APTLVLL+AV+LF EHL+ STL AF FIWAGL +YSVD WL+ RKR
Sbjct: 241 ALGFLQYVAPTLVLLEAVLLFGEHLAPSTLTAFAFIWAGLVVYSVDIWLSARKR 294