Pairwise Alignments

Query, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 304 a.a., putative permease (RarD protein) from Pseudomonas putida KT2440

 Score =  122 bits (306), Expect = 1e-32
 Identities = 83/269 (30%), Positives = 146/269 (54%), Gaps = 3/269 (1%)

Query: 9   GYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHPGWWRELRN 68
           G    L++  + GL  LY+KA+ ++PA+ ++  RVL S L  +LLL   K       +  
Sbjct: 11  GLSAALASNCLLGLSSLYWKALAALPALALLGCRVLMSLLCVTLLLAARKELVPLLCVLK 70

Query: 69  NPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLILGERLRRL 128
             R + +   +  L+AGNW T++W+  +G +LE+ LGY I P++ + LG+L+  ERL   
Sbjct: 71  R-RDIALHGAAAVLVAGNWGTFIWASIHGHVLESGLGYLIAPVLGISLGLLLYQERLSVP 129

Query: 129 QWLAVGMAAVGVAQQVWQVGSL-PWVSLVLALSFGFYGLIRKQAPVAALPGLVVETWMLV 187
           + L++ M    V   +++ G L   V LV+ +++G Y  ++K A +    GL +E+ +L 
Sbjct: 130 RGLSLTMVIGSVVYLLFEKGGLDSRVFLVIGVTWGTYTWLKKLARLPPWSGLFLESLVLG 189

Query: 188 PLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYTTLGFLQY 247
            L +  +L   T ++   A  ++  AL L+  G V+L+PL  F+ AAR LP + +G +Q+
Sbjct: 190 VLLMPLILWVSTPVAGIAALGSADTAL-LLLCGAVSLLPLALFSFAARRLPLSVMGLMQF 248

Query: 248 LAPTLVLLQAVVLFDEHLSSSTLAAFMFI 276
           + P      A++ + +  S   + AF  I
Sbjct: 249 VLPLTQFFVALMFYGQIPSHGAMLAFALI 277