Pairwise Alignments

Query, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 295 a.a., chloramphenicol-sensitive protein from Pseudomonas putida KT2440

 Score =  122 bits (306), Expect = 1e-32
 Identities = 86/303 (28%), Positives = 153/303 (50%), Gaps = 26/303 (8%)

Query: 8   RGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLV---WKHPGWWR 64
           +G +  + A  ++ +   Y   ++ +   EI   R L +    +L +LV   WK  G   
Sbjct: 3   KGIVSSVMASCLFAVMYFYTSLLKPLDGEEIFGWRTLLTLPCLTLFMLVSKDWKRVG--- 59

Query: 65  ELRNNPRRLGILALSGALIAGNWLT------YVWSVNNGRMLEASLGYYINPLINVLLGM 118
           EL    +R  +L L   ++  +WL       ++W+  +GR LE S+GY++ PL  VL G 
Sbjct: 60  ELMGRVKRTPVLLLG--MVGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGR 117

Query: 119 LILGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPG 178
           L+ GERL RLQ +AV  AA+GV  +++Q GS  W +L++ + +  Y ++R++     L G
Sbjct: 118 LVYGERLSRLQTVAVACAALGVGHELYQNGSFAWETLLVTIGYPVYFVLRRRCRTDNLGG 177

Query: 179 LVVETWMLVPLALGWLLLHPTA---MSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAAR 235
           L  +  +L+P AL +++  P +   + A    Y     L     G ++   L+ +  A+R
Sbjct: 178 LWCDMCLLLPWALYFVIQSPLSSADLQAHPGLYVLVPIL-----GAISASALIAYVLASR 232

Query: 236 HLPYTTLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNL---R 292
            LP++  G L Y+ P L L+   +L  E +       ++ IWA + +  ++ + +L   R
Sbjct: 233 MLPFSLFGLLSYVEPVL-LVGVALLLGETIGPDQWLTYLPIWAAVLVLVLEGFKHLLRQR 291

Query: 293 KRS 295
           +RS
Sbjct: 292 RRS 294