Pairwise Alignments

Query, 236 a.a., Exonuclease from Pseudomonas putida KT2440

Subject, 235 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 43.1 bits (100), Expect = 5e-09
 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 16/170 (9%)

Query: 40  RWVVLDLETSGLNP-NRDQVLSIGAVAIED-----GAIDFAQQFERTLHRPLQKTNASVL 93
           R +VLD ET+GL+  N D+++ IG V + +       + F    ER  H    K      
Sbjct: 2   RQIVLDTETTGLSAENGDRIIEIGCVELLNRKLTGNNLHFYLNPERDSHEDALK------ 55

Query: 94  IHGLGPSALAAGCDPAEALLDLLDFIGNSPVLAFHAPFDQRMLARALKESLGYRLQSPFL 153
           +HG+    L      A     LLD++ ++ V+  +APFD   L + + E LG+   +  L
Sbjct: 56  VHGISNEFLRDKPKFAAISDQLLDYLRDAEVIIHNAPFDISFLNKEM-ERLGHPPITTIL 114

Query: 154 -DIAELAPMLNPDTVLREAGLDDWVARFGLQVEER--HHASADAQVTAEL 200
             + +   M       +  GLD    R G+    R  H A  DA++ A++
Sbjct: 115 GQVTDSLVMAKEMFPGKRNGLDALCDRLGVDNSGRTLHGALLDAELLADV 164