Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 176 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  128 bits (322), Expect = 5e-35
 Identities = 67/152 (44%), Positives = 97/152 (63%), Gaps = 1/152 (0%)

Query: 15  LYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDT-PREPRAFLAAVAKGLMF 73
           LY  H GWLL  L+R +  R  A DL+ DTF+R+L R   +T P   R++LA +A+GL  
Sbjct: 14  LYGTHHGWLLGLLRRRLNDRWDAADLAHDTFIRILSRPPAETDPVRQRSYLATIARGLCI 73

Query: 74  DHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLHSRL 133
           DH+RR  LE+ +L  LA  PEA QPSPE + +I+E L  +D +L +L  K   AFL ++L
Sbjct: 74  DHWRRRQLERTWLQTLAERPEALQPSPEQRAIIVETLVEVDAMLARLPKKVSEAFLLAQL 133

Query: 134 DGMGHAEIAERLGVSVSRVRQYIAQGMRQCYV 165
            G+ + +IAE+LGV    V++Y+AQ +  C +
Sbjct: 134 HGLPYKQIAEQLGVGERMVKKYMAQALLHCAI 165