Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 172 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  139 bits (350), Expect = 3e-38
 Identities = 75/153 (49%), Positives = 102/153 (66%), Gaps = 1/153 (0%)

Query: 12  VGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQ-LDTPREPRAFLAAVAKG 70
           + +LYRDHR WL +WL+R +     A DLSQDTF+R+L   Q +   +EPRA+L  V K 
Sbjct: 15  LSSLYRDHRSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQMQEPRAYLVTVGKR 74

Query: 71  LMFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLH 130
           L+ +  +R +LEQAYL  LA +PEA  PSPE + L+LE L+A+D LL  L    R AFL 
Sbjct: 75  LLVNFHQRRSLEQAYLNALASLPEACVPSPEQRWLLLETLQALDELLDGLPVLVRRAFLW 134

Query: 131 SRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQC 163
           S+L+G+G+ +IAERL VS   V++Y+AQ    C
Sbjct: 135 SQLEGLGYRDIAERLDVSERTVKRYMAQAYEHC 167