Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 169 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  145 bits (366), Expect = 3e-40
 Identities = 71/156 (45%), Positives = 104/156 (66%)

Query: 15  LYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGLMFD 74
           LYRDH GWL  WL+R +  R+ A D++QDTF+RLL   +    +E R++LA +A+ L+ D
Sbjct: 14  LYRDHHGWLQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESRSYLAQIARNLVID 73

Query: 75  HFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLHSRLD 134
            +RR  +E+AYL  +A +PE E PS E + LILE L  ID +L ++    R AFL S+ +
Sbjct: 74  QWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMPDNVRQAFLLSQFE 133

Query: 135 GMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALYGE 170
           G+ +A+IAERLGV+VS V++Y+ + +  CY   Y E
Sbjct: 134 GLSYAQIAERLGVTVSSVQKYMTRAIVACYQVAYEE 169