Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 170 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 3e-36
 Identities = 66/153 (43%), Positives = 98/153 (64%)

Query: 12  VGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGL 71
           + ALYR+HR WL  WL+R +     A DL+QDTFVR++   Q    +EPRA+L  +A+ +
Sbjct: 10  IDALYREHRDWLQGWLRRRLGDGHTAADLTQDTFVRVISGGQAQAIQEPRAYLTTLAQRV 69

Query: 72  MFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLHS 131
           +++ +RR  LE+A+L  LA  P+   PSPE   L+ E ++ IDR L  L  K R AFL  
Sbjct: 70  LYNFWRRRELERAWLDALAAQPQELAPSPETYALVREAVETIDRWLDGLPPKVREAFLLR 129

Query: 132 RLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCY 164
           RL+G+ HA+IA R+G+S++ V +Y+ Q +   Y
Sbjct: 130 RLEGLAHADIAVRMGISITSVERYVKQAIVHLY 162