Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  139 bits (349), Expect = 3e-38
 Identities = 70/156 (44%), Positives = 97/156 (62%)

Query: 12  VGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGL 71
           V  LY  H  WL  WL+R + C   A DL+QDT++RLL   +     EPRAFLA VAK +
Sbjct: 15  VEGLYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLATVAKRV 74

Query: 72  MFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLHS 131
           + +HFRR  LE+AYL  LA +PE   P  E + +I E L A+D LL  L    + AFL +
Sbjct: 75  LCNHFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKRAFLLA 134

Query: 132 RLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVAL 167
           ++DG+G  EIA  LG+S++ V++Y+ +   +CY AL
Sbjct: 135 QVDGLGQGEIARELGISLATVKRYLNKAAMRCYFAL 170