Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  147 bits (370), Expect = 1e-40
 Identities = 73/159 (45%), Positives = 106/159 (66%)

Query: 12  VGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGL 71
           V  LY+ H  WL  WL+  + C + A DL+QDTFVRLL   Q+   +EPRA+L+++A+GL
Sbjct: 12  VALLYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGL 71

Query: 72  MFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLHS 131
           M D FRR ALE+AY   LA +PEAE PS E + +IL+ L+ +DR L +L  + R AFL +
Sbjct: 72  MIDQFRRRALERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLA 131

Query: 132 RLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALYGE 170
           +LDG+   ++A+RLGVS + V + +A+ +  CY   Y +
Sbjct: 132 QLDGLSIVQVAQRLGVSRATVERDLAKALGACYRLRYAD 170