Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 173 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 3e-40
 Identities = 78/162 (48%), Positives = 100/162 (61%)

Query: 7   PHADLVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAA 66
           P  D V  LY DH GWL  WL+  +     A DL+QDTFVRLL R +      PRAFL  
Sbjct: 8   PSNDSVQTLYSDHHGWLHTWLRSKLGNAADAADLAQDTFVRLLQRREQLQLNAPRAFLRT 67

Query: 67  VAKGLMFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARA 126
           VA+GL+ DH+RR  L +AYL  LA +PEA  PS E + L+LE L+ I R+L  L  K R 
Sbjct: 68  VARGLVIDHWRREELHRAYLEALAHVPEALVPSVETRELLLELLERIARMLDGLKPKVRR 127

Query: 127 AFLHSRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALY 168
           AFL ++ +G+ H  IAE++G+SV  V +YIA  +  CYV  Y
Sbjct: 128 AFLLAQCEGLKHQAIAEQMGISVRTVERYIANALYHCYVLRY 169