Pairwise Alignments

Query, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 308 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  136 bits (342), Expect = 7e-37
 Identities = 101/313 (32%), Positives = 142/313 (45%), Gaps = 9/313 (2%)

Query: 6   VSSRVLEAAIAWKLSLGESSGTPDERNEFMRWHAASEEHARAWRQLGAMDQRVSAAAGPA 65
           +S  V  AA  W   L   + T  +      W  +  +H + W++   + QR S      
Sbjct: 1   MSRDVARAAAQWLALLESGAATERDHAALQHWRDSHPQHEQTWQKAQTLRQRFSDLPQAL 60

Query: 66  RQALLQSRASLRRRIGKVGGGLAGTFLLGALLAWVGAPSLAPSYWLADQRTATGELRTLR 125
             A L      RR + K   G+A         AW+ +  L    W AD  TATGE + + 
Sbjct: 61  AMASLDRPHPGRRAVLKRALGIAAL----VPTAWLISRQLPIEAWRADLHTATGERKRIP 116

Query: 126 LEDGTLLSLNTHTAVDIEYAGAQRVIVLHQGEISVETGHQDPRPLLVRTEDGRLRPLGTR 185
           L DG  L LNT TAVD++ A  QR I L  GE+++         + VRT  G L      
Sbjct: 117 LADGGSLQLNTATAVDVDLA--QRRITLVDGELALNV--PGAAAVTVRTRYGELSVSQAD 172

Query: 186 FLVRREAGGTRLEVLQASVAAMPHDSGDEQVLREGQQVLMNANGLGEVGTVPAGADAWTR 245
             VR++A G  + VL+ SV     + G    L+ GQQ  + A+GLG           W  
Sbjct: 173 VCVRQQASGCLVSVLKGSVQVRDLN-GQMTTLQGGQQAPLKASGLGAWVPFDVVQLGWRD 231

Query: 246 GMLVVDNVRLGDLLATLGQYRSGYLGVDAKVADLRVTGSFPLTNTDLALASLVPALPVKI 305
           G+L   N  LGD L  L +YR G L  +  +  LRVTGSF L +TD  L  L   L +++
Sbjct: 232 GVLTAQNQALGDFLRELERYRPGVLRWEPSLETLRVTGSFRLDDTDRILNLLASTLGLEL 291

Query: 306 ERHTQWWVNVTSK 318
              T++WV +T +
Sbjct: 292 HARTRYWVTLTPR 304