Pairwise Alignments

Query, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 316 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  101 bits (251), Expect = 3e-26
 Identities = 85/304 (27%), Positives = 135/304 (44%), Gaps = 5/304 (1%)

Query: 6   VSSRVLEAAIAWKLSLGESSGTPDERNEFMRWHAASEEHARAWRQLGAMDQRVSAAAGPA 65
           + +R  + A  W + L ++  +  ER  F  W     +H   +  L  +           
Sbjct: 1   MDNRARDEAAQWFVRLQDAELSIAERQRFDAWRNEHPDHQYEFDVLQGLWSATGLLPKAR 60

Query: 66  RQALLQSRASLRRRIGKVGGGLAGTFLLGALLAWVGAPSLAPSYWLADQRTATGELRTLR 125
            QAL ++     +R   +   +A   +  AL   + +    P  + A+  T  GE R + 
Sbjct: 61  LQALCEAPVERPKRRAVLRYAVAAGVIAVALGLGLFSGLDHPKPYSAEFSTGVGEHRQVA 120

Query: 126 LEDGTLLSLNTHTAVDIEYAGAQRVIVLHQGEISVETGHQDPRPLLVRTEDGRLRPLGTR 185
           L DG+++ LN+ T V ++Y   +R + L QGE      H   RP +V    G++   GTR
Sbjct: 121 LPDGSVMDLNSRTVVAVQYEKGRRGVELKQGEAMFSVEHDTSRPFVVAAGAGQVTVTGTR 180

Query: 186 FLVRREAGGTRLEVLQASVAAMPHDSGDEQV-LREGQQV-LMNANGLGEVGTV-PAGADA 242
           F VRR+ G TR+ +++A    +  DS D  V L  G    + N   +    TV      A
Sbjct: 181 FDVRRDEGQTRV-MVEAGTVKVQGDSPDNLVTLTAGLGTHVDNKGSVAAAYTVNTEELTA 239

Query: 243 WTRGMLVVDNVRLGDLLATLGQYRSGYLGVDA-KVADLRVTGSFPLTNTDLALASLVPAL 301
           W  G LV +N  LG++   + +YR   L V    V +LR+T  F   +TD  L +L   L
Sbjct: 240 WRTGKLVFNNALLGEVAREVSRYRERPLRVSTPAVGNLRLTSVFKANDTDALLKALPHIL 299

Query: 302 PVKI 305
           PV +
Sbjct: 300 PVAL 303