Pairwise Alignments

Query, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 313 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 1e-44
 Identities = 112/317 (35%), Positives = 163/317 (51%), Gaps = 13/317 (4%)

Query: 7   SSRVLEAAIAWKLSLGESSGTPDERNEFMRWHAASEEHARAWRQLGAMDQRVSAAAGPAR 66
           S++V E A+ W + +   +  P ++  + +W  A  EH RAW  +  ++QR+     P  
Sbjct: 4   STQVAEQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPSPLA 63

Query: 67  QALLQSRASLRRRIGKVGGGLAGTFLLGALLAWVGAPSLAPSYWL----ADQRTATGELR 122
            A L +  S  RR       L    +LGA  A   A SL   + L    AD R+  G+ R
Sbjct: 64  HAALNAPTSTSRR-----QALKLLLILGAGSA--AAWSLRQQHILPPLTADYRSPVGQRR 116

Query: 123 TLRLEDGTLLSLNTHTAVDIEYAGAQRVIVLHQGEISVETGHQDPRPLLVRTEDGRLRPL 182
            ++L DG+ L LNT +AVD+ + G QR+I L +GEI + TGH    PL V T  G L   
Sbjct: 117 KVQLADGSQLQLNTGSAVDVHFDGRQRLIRLLEGEILL-TGHAAGTPLQVLTGQGLLTSQ 175

Query: 183 GTRFLVRREAGGTRLEVLQASVAAMPHD-SGDEQVLREGQQVLMNANGLGEVGTVPAGAD 241
             R  VR+    T+L VL   V  MP   SG    +   +QV     G        A + 
Sbjct: 176 AARMNVRQFNDHTQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDANSG 235

Query: 242 AWTRGMLVVDNVRLGDLLATLGQYRSGYLGVDAKVADLRVTGSFPLTNTDLALASLVPAL 301
           AW  GMLV  ++RL D L  LG+YR G +  D +VA+L ++GS+PL +++  L  L  +L
Sbjct: 236 AWADGMLVAAHMRLEDFLGELGRYRRGQVNCDPQVANLLISGSYPLDDSERILDLLEVSL 295

Query: 302 PVKIERHTQWWVNVTSK 318
           PVK+ R T++WV V ++
Sbjct: 296 PVKVRRFTRYWVTVQAR 312