Pairwise Alignments

Query, 370 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 378 a.a., PepSY-associated TM helix domain-containing protein from Variovorax sp. OAS795

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 95/380 (25%), Positives = 148/380 (38%), Gaps = 41/380 (10%)

Query: 1   MKSPTIRRWSLIHTWSSLVCTLFLLLLAVTGLPLIFHHELEHLLGDAPELRE-MPAGTPH 59
           +++P  R W  IH W  L     L L A+ G  L+    ++      PEL       TP 
Sbjct: 2   LRAPLRRLWLKIHRWIGLSLGPVLALTALLGAVLVVALPIDRCAH--PELFVGRSTATP- 58

Query: 60  LDLQQLVLKAEQHRPGEVMQYFGYDED---EPNGVVAITAATASTDPNLSHTFMLDARTG 116
             +  L L+  + R   ++  FG D +    P      T       P    T  LD  TG
Sbjct: 59  --VSPLPLEPLRQR---LVAEFGPDTNFTLRPPRSPGETLWVYVRGP-WEGTLYLDPSTG 112

Query: 117 EAVAMPAANGGFMMVMLRLHVDMFAGLPGKLLLAFMGVLFIVAIVSGTVLYAPFMRRLEF 176
                  ++ G   ++  LH  +     GK +LAF+ + ++  +V+G VL+ P       
Sbjct: 113 AEQGRRESHEGAYNLLFELHSSLLMDDTGKGILAFVALAYLFLLVTGVVLWWPTRWPPSL 172

Query: 177 GTVRHKKSRRLRWLDLHNLIGVVTLAWALTVSV-TGVISA---LSDLVIAAWRNDSLAAM 232
               ++   R    DLH   G V L   + VSV TG   A   L + + AA   + +   
Sbjct: 173 RIALNRGLLR-GLFDLHRTGGAV-LGLLIAVSVFTGAYMAWRPLGNFISAAMGQEPVKPP 230

Query: 233 VAPYRDAPPLVERAPATRLLDIAEQAAPGMRPDFIAFPGT---------RFSSEHHYAVF 283
             P   A     R     L+  A+   PG    ++  P           R + + H    
Sbjct: 231 TVPKGTAAG--PRLSLDALVARAQNVFPGQPIGYVQVPAKPNRPMRVRFRLADDPH---- 284

Query: 284 MNGATHLSSHLFTPVLIDARTLEVTAVGDRPWYMDAMGLSQPLHFGDYGGRPMQILWALL 343
            NG + +  H  T  ++  R  +    G+      A+ +  PLH G  GG   Q + ALL
Sbjct: 285 PNGISSVWLHPLTGEVLAVRRWQDLDAGN-----GAVAVIYPLHTGVLGGPVHQAVVALL 339

Query: 344 DVLTIIVLG-SGLYLWWSKQ 362
             L +  LG SG++LWW ++
Sbjct: 340 G-LALGGLGLSGIWLWWRRR 358



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 12/137 (8%)

Query: 53  MPAGT---PHLDLQQLVLKAEQHRPGEVMQYFGYDEDEPNGVVAITAATA-STDPNLSHT 108
           +P GT   P L L  LV +A+   PG+ + Y      +PN  + +    A    PN   +
Sbjct: 232 VPKGTAAGPRLSLDALVARAQNVFPGQPIGYVQVPA-KPNRPMRVRFRLADDPHPNGISS 290

Query: 109 FMLDARTGEAVAMPA-----ANGGFMMVMLRLHVDMFAGLPGKLLLAFMGVLFIVAIVSG 163
             L   TGE +A+       A  G + V+  LH  +  G   + ++A +G+      +SG
Sbjct: 291 VWLHPLTGEVLAVRRWQDLDAGNGAVAVIYPLHTGVLGGPVHQAVVALLGLALGGLGLSG 350

Query: 164 TVLYAPFMRRLEFGTVR 180
             L+  + RR     VR
Sbjct: 351 IWLW--WRRRAVAAAVR 365