Pairwise Alignments

Query, 370 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 397 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 9e-26
 Identities = 94/374 (25%), Positives = 161/374 (43%), Gaps = 31/374 (8%)

Query: 2   KSPTIRRWSLIHTWSSLVCTLFLLLLAVTGLPLIFHHELEHLLGDAPELREMPAGTPHLD 61
           K    R W L+H+W +L    F+L++  TG+  +   E+  L   A    +  A T  + 
Sbjct: 6   KKSKSRLWFLVHSWLALPIWFFVLIVCFTGMLAVVSQEIVWLADPAARANKPDADTERMS 65

Query: 62  LQQLVLKAEQHRPGEVMQYFGYDEDEPNGVVAITAATASTDPNL---SHTFMLDARTGE- 117
            QQ++    +  P  V++     +     V A       T P L    +T  +  RT + 
Sbjct: 66  FQQVLEALNKAEPDMVVERLSQPDGSHFAVKANVTLPDGTSPTLYVNPYTGTIQGRTPDF 125

Query: 118 -AVAMPAANGGFMMVMLRLHVDMFAGLPGKLLLAFMGVLFIVAIVSGTVLYAPFMRRLEF 176
              A   A  G+ +V             G  L++ +G+  + ++V+G V+Y  F +   F
Sbjct: 126 NFEAFTRALHGWWLVPFTNGFSW-----GWYLVSLLGLPMLASLVTGLVVYKKFWKGF-F 179

Query: 177 GTVRHKKSRRLRWLDLHNLIGVVTLAWALTVSVTG----VISALSDLVIAAWRNDSLAAM 232
             VR     R+ W DLH L GV ++ +   +S+TG    + + LSD  I    +      
Sbjct: 180 KPVRTGHGSRIFWGDLHRLSGVWSIWFIAVISITGTWFLIQAILSDNHITI--SSRPIVP 237

Query: 233 VAPYRDAPPLVERAPATRL-LD----IAEQAAPGMRPDFIAFPGTRFSSEHHYAVFMNGA 287
           V    + P   + +PA+R+ LD    +A  A PG+    I  P T +S   H  +   G 
Sbjct: 238 VIAREEVPQTPDGSPASRIDLDEAARLAGLAIPGLEVTSITLPATAYS---HVTLSGPGW 294

Query: 288 THLSSHLFTPVLIDARTLEVTA---VGDRPWYMDAMGLSQPLHFGDYGGRPMQILWALLD 344
             L   +F    ++  T  V +   + DR          +PLH GD+GG P++++W    
Sbjct: 295 YPL---MFQSASVNPYTRNVDSQFLISDRSALEFVTESMRPLHTGDFGGLPIKLVWFFFG 351

Query: 345 VLTIIVLGSGLYLW 358
           ++  +++ SGL +W
Sbjct: 352 LILTLMVLSGLLIW 365