Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 987 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  339 bits (869), Expect = 6e-97
 Identities = 201/552 (36%), Positives = 312/552 (56%), Gaps = 13/552 (2%)

Query: 335 RRAAASALHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPAL 394
           RR A   L L Q     +    ++ +  GR+  VNP+F AIT +   E+ G+ +  L + 
Sbjct: 420 RRTAEHHLTLAQAVFTNTQEGLVVTDLAGRITAVNPAFVAITGHQEAEILGQNMRFLSSG 479

Query: 395 EN---LSELLFDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIY 451
            +     +LL+   ++L     W+GE  +RRK+   Y  Q  IS VYG       Y+G +
Sbjct: 480 RHDRLFYQLLW---TALKDTGVWRGEIWNRRKDGTLYLQQTVISTVYGRTGAAESYVGAF 536

Query: 452 EDVTQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLDERFARDGESSMCLLLVDIDNFKRI 511
            D+TQ + ++  ++RL   D LT L NR      ++    R+G +   +L +DID+ K I
Sbjct: 537 NDITQARKSEIEVDRLTRYDPLTGLPNRTLTYSLIEHELTREG-TRCAVLYIDIDHLKTI 595

Query: 512 NDSLGHQTGDKLLISLARRLRNSLHSGGILARFASNEFAVLLDDTSLEDGQGV---AQQL 568
           NDSLG   GD +L + A+R+R +      + R+ ++EF V++D  + E  Q V   A +L
Sbjct: 596 NDSLGFAAGDTVLRAAAQRIRRTAPEDATIGRYGADEFVVVID--AGEGPQAVVSLAVRL 653

Query: 569 LCTLDKPMFVDNQL-INVTASVGLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFT 627
           +  L +P   +    + V AS+G++  P    D  +L+++A  AL +AK+        +T
Sbjct: 654 IEALGEPFAAEGVSDLFVNASIGISLFPEDASDADTLLQHAHSALFEAKSRDGRTYAFYT 713

Query: 628 EVLNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRP 687
           + L  +A  ++ +  NLRRALT++E  V YQP + L    ++G EAL+RW  PE  MI P
Sbjct: 714 DALTRDARARIQLVANLRRALTEHEFTVHYQPIVRLEDQTIVGAEALVRWVTPEGEMIGP 773

Query: 688 DQFISVAEETGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASIS 747
           D+FI VAEETGLI+P+G +V+  AC    + RKAGL    VA+N+S  Q +  D+ A   
Sbjct: 774 DRFIPVAEETGLIVPLGDFVLAAACTQMARWRKAGLPCAFVAVNISAGQLNATDICAKTE 833

Query: 748 TILKEEALPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKK 807
             L    +P   +E E+TE +L  A      +L  +  LG+ +A+DDFGTGYSSL+YLK+
Sbjct: 834 AALAASGVPADSIEFEITESMLFGADSGAESKLKRITELGVRIAIDDFGTGYSSLAYLKR 893

Query: 808 FPIDILKIDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCD 867
           FPI  LKID+SF++++P +  D E+  A++ M   L ++V+AEG+E   Q+AFL  + C 
Sbjct: 894 FPISRLKIDKSFVDDLPLSVVDGELVRAMIEMGRALHIEVLAEGVEEAGQMAFLAANGCT 953

Query: 868 VGQGYLFDRPIP 879
            GQG+ + RP+P
Sbjct: 954 YGQGFFWSRPLP 965



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 334 KRRAAASALHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGEL 391
           ++ A  +A   F+   EQ+A     ++ DGR   VN +  A+  Y   E+ GR   ++
Sbjct: 293 QKAALHAAEERFRATFEQAAEGIAHLDLDGRFLRVNETLCALLGYGRAELLGRSYADV 350