Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  366 bits (940), Expect = e-105
 Identities = 230/581 (39%), Positives = 328/581 (56%), Gaps = 34/581 (5%)

Query: 330  ITNHKRRAAA--SALHLFQRAVEQSASAFLLVNRD-GRVEYVNPSFTAITQYSTDEVQGR 386
            IT  +R  AA  ++   F +A   S  A  +  RD GR   VN  F  +T Y  +E  G 
Sbjct: 522  ITQQQRSEAALKASEEKFAKAFHSSPDAISITERDTGRYVEVNDGFCRLTGYRAEEAIGL 581

Query: 387  QLGELP--ALENLSELLFDSPSSLAMGNSWQGEFKSRRKNLEPYW----GQLSISKVYGD 440
             L ++   A EN    L             + + K R   LE  W    G+L   +V  +
Sbjct: 582  TLYQIGIWADENQRAALLA-----------ELQIKGRINYLEMLWHNKRGELLAVEVSVE 630

Query: 441  NRELTH---YIGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLDERFARDGESS 497
               L      +    DV+  K AQ +I  LAY D LTNL NR   +  L ++ A     +
Sbjct: 631  PITLNETPCLLLTARDVSLLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHN 690

Query: 498  M--CLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLHSGGILARFASNEFAVLL-- 553
            +   LL +D+D+FK INDSLGH  GD +L  +  RL  S+     +AR   +EF VLL  
Sbjct: 691  LRGALLFLDLDHFKHINDSLGHPVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSG 750

Query: 554  -DDTSLEDG---QGVAQQLLCTLDKPMFVDNQLINVTASVGLACAPLHGVDPASLMKNAG 609
             D T  E     Q +A  L   L +PMF+D   + VT S+G+A  P HG  PA L+K A 
Sbjct: 751  LDGTRTEVSNQVQELADTLRELLSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRAD 810

Query: 610  LALHKAKANGKHQVQVFTEVLNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLL 669
            +AL++AK +G++  Q+F   +   AS +L +E +LR AL++ E  V YQP++  R  R++
Sbjct: 811  IALYRAKDSGRNTTQMFHNSMQKTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIV 870

Query: 670  GLEALLRWNHPERGMIRPDQFISVAEETGLIIPIGKWVVRQACCMSQQLRKAGLG---NL 726
            G EAL+RW HP+ G   P +FI V E++GLI+ +G W++ +AC   QQL   GL    N 
Sbjct: 871  GAEALVRWQHPQLGAQSPSEFIKVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNF 930

Query: 727  HVAINLSPKQFSDPDLVASISTILKEEALPPHLLELELTEGLLLEASEDTHRQLDELKAL 786
             + +N+SP+QF   D V  +   LK+  LP  LL+LE+TEG++++  +DT  ++  LK L
Sbjct: 931  SLCVNISPRQFRQNDFVERVERSLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKL 990

Query: 787  GLTLAMDDFGTGYSSLSYLKKFPIDILKIDRSFINEIPDNQDDMEITSAVVAMAHNLKLK 846
            G++ AMDDFGTGYSSL+YLK+ P+D LKID+SF+ +   + +D EI  A+VAMA +L L+
Sbjct: 991  GVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLE 1050

Query: 847  VVAEGIETPEQLAFLRRHRCDVGQGYLFDRPIPGRELAERL 887
            V+AEG+ET +QLAFL+   C + QGYL  RP+P     ERL
Sbjct: 1051 VIAEGVETQDQLAFLQGLGCHLYQGYLHSRPLPMIGFRERL 1091