Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  365 bits (938), Expect = e-105
 Identities = 215/550 (39%), Positives = 325/550 (59%), Gaps = 12/550 (2%)

Query: 342  LHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQLGELPALENLSELL 401
            L L+ +  E S+   L++N + R+   N +   +T +   ++ G    +L +  +L    
Sbjct: 501  LMLWAKVFEASSEGILIINGEHRILTANRALCRLTGHDLGDLVGEPPEQLMSDGSLH--F 558

Query: 402  FDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDVTQTKLAQ 461
             D    L    +WQGE   RR+N + Y   L  S V      ++HYI    DV+  K ++
Sbjct: 559  ADLWPVLDQRGTWQGEVTVRRRNGDSYPAWLVASVVRDGPERISHYIFTSIDVSDRKRSE 618

Query: 462  QRIERLAYTDNLTNLGNRPAFIRSLD---ERFARDGESSMCLLLVDIDNFKRINDSLGHQ 518
             RI  LA+ D LT L NR   I  L    ++  R G+  + +L +D+D FK INDSLGH 
Sbjct: 619  ARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQR-VGVLFIDLDRFKNINDSLGHH 677

Query: 519  TGDKLLISLARRLRNSLHSGGILARFASNEFAVLLDDTSLEDGQG----VAQQLLCTLDK 574
             GD LL S+A R+  ++  G  ++R   +EF V+L++ +  DGQ     V ++L+  + +
Sbjct: 678  VGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVA--DGQEILSLVERRLISLIRQ 735

Query: 575  PMFVDNQLINVTASVGLACAPLHGVDPASLMKNAGLALHKAKANGKHQVQVFTEVLNAEA 634
            P  +D   I+V+ SVG+A  P    D  +LM++A +A++++KA+G+   + FT  +N  A
Sbjct: 736  PHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASGRDTARFFTPEMNERA 795

Query: 635  SYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPDQFISVA 694
              +L +E++LR A+ ++EL + YQP++   SG L+ +EALLRW   E G +RP QFI +A
Sbjct: 796  QQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRWQSAELGQVRPAQFIPIA 855

Query: 695  EETGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASISTILKEEA 754
            EE+G I+ IG WV+ QAC      R+ GLG + VAIN+S  Q  D  L+  +   +    
Sbjct: 856  EESGQIVAIGAWVIEQACAQHAAWRRDGLGAIRVAINMSALQLRDGGLLEVLRGAIALYG 915

Query: 755  LPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKFPIDILK 814
            + P  LE+ELTE  L++A+E +  QL  LK+LG+ L++DDFGTGYSSL+YL +FPID LK
Sbjct: 916  VSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTGYSSLNYLNRFPIDKLK 975

Query: 815  IDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAFLRRHRCDVGQGYLF 874
            IDRSFI+++  +  DM I  A++ + H L L+VVAEG+E  E+   LR  RCD  QGYL 
Sbjct: 976  IDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEADTLRAARCDELQGYLI 1035

Query: 875  DRPIPGRELA 884
             RP+P  +LA
Sbjct: 1036 SRPMPAGKLA 1045