Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  370 bits (951), Expect = e-106
 Identities = 225/576 (39%), Positives = 327/576 (56%), Gaps = 16/576 (2%)

Query: 330  ITNHKRRAAA--SALHLFQRAVEQSASAFLLVNR-DGRVEYVNPSFTAITQYSTDEVQGR 386
            IT  +R  AA  S+   F +A   S  A  +  R  GR   VN  F  +T YSTDEV G 
Sbjct: 522  ITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGH 581

Query: 387  QLGELPALENLSELLFDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTH 446
             + E+    +  +           G     E   R K  +    ++S+  +     E+  
Sbjct: 582  TVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPI--TLNEVDC 639

Query: 447  YIGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLDERFARDGESSM--CLLLVD 504
             +    DV+Q K AQ +I  LAY D LTNL NR   +  L ++ A     ++   LL +D
Sbjct: 640  LLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLD 699

Query: 505  IDNFKRINDSLGHQTGDKLLISLARRLRNSLHSGGILARFASNEFAVLLD--DTSLEDGQ 562
            +D+FK INDSLGH  GD +L  +  RL  S+     +AR   +EF VLL   + S E  +
Sbjct: 700  LDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVE 759

Query: 563  GVAQQLLCTLDK----PMFVDNQLINVTASVGLACAPLHGVDPASLMKNAGLALHKAKAN 618
               ++L  TL +    PM +D Q + VT S+G+A  P HG  PA L+K A +AL++AK +
Sbjct: 760  EKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDS 819

Query: 619  GKHQVQVFTEVLNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWN 678
            G++  Q+F   +   AS +L +EN+LR AL + EL + +QP++  R  R++G E LLRW+
Sbjct: 820  GRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWH 879

Query: 679  HPERGMIRPDQFISVAEETGLIIPIGKWVVRQACCMSQQLRKAGL---GNLHVAINLSPK 735
            HP+ G   P QFI V EE+GLI+ +G W++ +AC    ++   GL    + ++ +N+SP+
Sbjct: 880  HPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPR 939

Query: 736  QFSDPDLVASISTILKEEALPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDF 795
            QF   D V  +   L +  LP  +L LE+TEG++++  EDT  ++ ELK  G++ AMDDF
Sbjct: 940  QFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDF 999

Query: 796  GTGYSSLSYLKKFPIDILKIDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETP 855
            GTGYSSL+YLK+ P+D LKID+SF+ + P + +D EI  A+VAMA +L L V+AEG+E  
Sbjct: 1000 GTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELT 1059

Query: 856  EQLAFLRRHRCDVGQGYLFDRPIPGRELAERLKRYP 891
            EQLAFL R  C + QGYL  RP+P  E  + L   P
Sbjct: 1060 EQLAFLERLGCHLYQGYLHSRPLPLPEFRQMLLEAP 1095