Pairwise Alignments

Query, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  411 bits (1056), Expect = e-118
 Identities = 242/622 (38%), Positives = 356/622 (57%), Gaps = 17/622 (2%)

Query: 268  DPRTRALAQSMRPENKAMLDASIRVDGQVIGVLCLEQSGQPRAWQSDEIAFAGELADQFA 327
            DP   A   S  P    + D  +R DG+ I +    +      W  D+  F G L     
Sbjct: 651  DPAQMAQLCSQLPTQLFLFDC-LRADGRKIPI----ELRLVLVWDDDQ-RFEGVLG--VG 702

Query: 328  QVITNHKRRAAASALHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTDEVQGRQ 387
            + I+  +R  A   L +     E S SA L+ +  G +   N +F+ ++ Y+  EV  + 
Sbjct: 703  RDISQQRR--AEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQL 760

Query: 388  LGELPALENLSELLFDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHY 447
             G L   E     L      L    SW+GE   +R++ + Y   + I+ V  D  +L  Y
Sbjct: 761  PGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASY 820

Query: 448  IGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLDERF--ARDGESSMCLLLVDI 505
            +  + D+++ K ++QRI RLAY D LT+L NR  F   L      A   ++ + L+ +D+
Sbjct: 821  VCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDL 880

Query: 506  DNFKRINDSLGHQTGDKLLISLARRLRNSLHSGGILARFASNEFAVLLD-----DTSLED 560
            D FK INDSLGH  GD++L  +A RL   +     +AR   +EF +LL      + +L  
Sbjct: 881  DRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNR 940

Query: 561  GQGVAQQLLCTLDKPMFVDNQLINVTASVGLACAPLHGVDPASLMKNAGLALHKAKANGK 620
               VA+ +L +L +P  ++N+   VTAS+G+A +P  G + + LMKNA  A++ AK  GK
Sbjct: 941  AIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGK 1000

Query: 621  HQVQVFTEVLNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHP 680
            +  Q +   +NA A  +L +E++LR A+ QNE  ++YQP+      RL G EALLRW HP
Sbjct: 1001 NNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHP 1060

Query: 681  ERGMIRPDQFISVAEETGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDP 740
             RG++ P  FI V EE GL++ +G WV+R+A    +   KA +    V++N+S +QFSD 
Sbjct: 1061 TRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDG 1120

Query: 741  DLVASISTILKEEALPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYS 800
             L   I+ IL+E  LPP  LELELTE +L+    +  + L  LK LGL++A+DDFGTGYS
Sbjct: 1121 QLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYS 1180

Query: 801  SLSYLKKFPIDILKIDRSFINEIPDNQDDMEITSAVVAMAHNLKLKVVAEGIETPEQLAF 860
            SL+YLK+FPID+LKIDR+F++ +P+ + D +I  A++AMAH+L L V+AEG+ET EQL F
Sbjct: 1181 SLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEF 1240

Query: 861  LRRHRCDVGQGYLFDRPIPGRE 882
            LR H CD  QGYLF RP+P  +
Sbjct: 1241 LREHGCDEVQGYLFGRPMPAHQ 1262