Pairwise Alignments

Query, 352 a.a., transposase from Pseudomonas putida KT2440

Subject, 408 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  180 bits (457), Expect = 5e-50
 Identities = 122/335 (36%), Positives = 173/335 (51%), Gaps = 11/335 (3%)

Query: 9   VDLAKQVFQLAGEDATGRVIYEDRIKSRQAFHDFLLRLPTTVAVLMECGPGAQAWARLLQ 68
           +DL K    + G D TGRV+   R++ R+    F   L   V V ME   GA    R L 
Sbjct: 75  IDLGKNSCSVVGLDGTGRVVVRRRMR-RETVIAFAGSLAPCV-VAMEACCGAHHMGRALV 132

Query: 69  AKGNPVRILPAQRVAEHRSGAKNDRNDCYAILRAGRDTSIASIPIKSTTALAIQALHRIR 128
           A G+ VR++  + V  +    KND  D  AI  A    ++  + +KS   L +Q LHRIR
Sbjct: 133 AHGHTVRLMSPEYVRPYVKAQKNDDRDAEAIAEAATRPTMRFVELKSQEQLDMQTLHRIR 192

Query: 129 RGNIKRHTALGNQIRGLLLEHGVSMPQGDAAINKHVPQALEDASLPLPDLLRELLDELLM 188
              +   T+L NQIR LLLE G  +PQG A +   + + LE     L   +  L+ ++  
Sbjct: 193 DQLVGERTSLMNQIRSLLLERGHIVPQGRAKLAVRLGEMLEAEEPVLGFRIHRLVADMRA 252

Query: 189 DWLSLGERITALSRRLEATAQEDKVAQRLITIRGVGPIIATAIVAKQTDPSRFASGRMYS 248
            W++L ERI  L       A  D+  QRL+TI G+G + ATA+VA   D   FA GR  +
Sbjct: 253 RWIALDERIADLDAEFAQAALTDERTQRLLTIPGIGALNATALVAAVGDARTFARGRDLA 312

Query: 249 AFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSVLSQLRPDSDQPDDRRLLRW- 307
           A+ G+VP Q ++G K RL  ++KRG  Y+R ++IQGA S L  +        D RL  W 
Sbjct: 313 AWLGLVPRQATTGGKPRLLGITKRGSRYLRKILIQGARSSLPTM-----SKSDTRLGAWV 367

Query: 308 ---LSRLGRKEAAIRLANRNLRIIWALLQSDQVYQ 339
              LSR  +    + LA +  RI+WALL+  + Y+
Sbjct: 368 RGLLSRAHQNTVVVALAAKMARIVWALLRHGRTYE 402