Pairwise Alignments

Query, 352 a.a., transposase from Pseudomonas putida KT2440

Subject, 338 a.a., Mobile element protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  179 bits (453), Expect = 1e-49
 Identities = 117/351 (33%), Positives = 185/351 (52%), Gaps = 17/351 (4%)

Query: 3   LCTTICVDLAKQVFQLAGEDATGRVIYEDRIKSRQAFHDFLLRLPTTVAVLMECGPGAQA 62
           +   I +D+AK+ FQL   D     I + ++K  +    F  R P  VA  ME    +  
Sbjct: 1   MLAVIGLDIAKRFFQLHSVDPDTGEITKLKLKRAEMVPFFSNRQPCVVA--MEACGSSHH 58

Query: 63  WARLLQAKGNPVRILPAQRVAEHRSGAKNDRNDCYAILRAGRDTSIASIPIKSTTALAIQ 122
           WAR L+A G+ VR++  + V     G KND  D  AI  A +   +  +P+K+    AI 
Sbjct: 59  WARQLRALGHEVRLIATKFVKPFVKGNKNDAADARAIWEAAQRPEMRFVPVKTEAQQAIL 118

Query: 123 ALHRIRRGNIKRHTALGNQIRGLLLEHGVSMPQGDAAINKHVPQALEDASLPLPDLLREL 182
           ALH +R G +K  TA  +Q+R +  E G ++P+G     K +P+A       +P +  E 
Sbjct: 119 ALHTMRDGLVKARTAQLHQLRAVFYELGFALPEGRHWCVKRLPEAFASLEDKIPAMAIEA 178

Query: 183 LDELLMDWLSLGERITALSRRLEATAQEDKVAQRLITIRGVGPIIATAIVAKQTDPSRFA 242
           + +     L L ER+ A+ R+LEA  + D+  +RL+ I GVG + AT+IVA   D   F+
Sbjct: 179 MRDQYQLILQLSERVDAIERKLEAFKRSDERCERLLQIPGVGLLTATSIVASVGDAKEFS 238

Query: 243 SGRMYSAFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSVLSQLRPDSDQPDDR 302
           SGR ++A+ G+VP    +G ++R+  MSK+G+ Y+R+++I  + +V+++ +  S      
Sbjct: 239 SGREFAAWLGVVPRHTGTGGRVRILGMSKQGNSYLRTMLIHCSRAVMARQKEHSP----- 293

Query: 303 RLLRWLSRLGRKE----AAIRLANRNLRIIWALLQSDQVYQRKPNEKPEAA 349
               WL RL R      A + LAN+  R IWA+L   + Y  KP  +  AA
Sbjct: 294 ----WLERLMRDRPWNVAVVALANKIARTIWAMLAHSRNY--KPEIQQSAA 338