Pairwise Alignments

Query, 352 a.a., transposase from Pseudomonas putida KT2440

Subject, 334 a.a., IS110 family transposase from Dickeya dianthicola ME23

 Score =  165 bits (417), Expect = 2e-45
 Identities = 115/335 (34%), Positives = 169/335 (50%), Gaps = 14/335 (4%)

Query: 1   MELCTTICVDLAKQVFQLAGEDATGRVIYEDRIKSRQAFHDFLLRLPTTVAVLMECGPGA 60
           M+  T I +DL K  F +  +D  G  +   +  SR     FL   P    V+  C  GA
Sbjct: 1   MQTATLIGIDLGKYSFHVHCQDRQGNALLRKKF-SRSQLATFLATYPACTVVMESCA-GA 58

Query: 61  QAWARLLQAKGNPVRILPAQRVAEHRSGAKNDRNDCYAILRAGRDTSIASIPIKSTTALA 120
              AR +   G+ V+++  Q V       KND  D  AI  A    S+  +  ++    A
Sbjct: 59  HYMARTVSQLGHRVKLIAPQFVRPFVKSNKNDFVDAEAICEAASRPSMRFVTPRTEDQQA 118

Query: 121 IQALHRIRRGNIKRHTALGNQIRGLLLEHGVSMPQGDAAINKHVPQALEDASLPLPDLLR 180
           + ALHR+R   I+      NQ+   LLE G+S+P+G A I K +P  LE+  +P PDL R
Sbjct: 119 MSALHRVRSSLIRERVKTTNQMHAFLLEFGISLPRGSAVI-KRLPSVLEENGIP-PDLER 176

Query: 181 ELLDELLMDWLSLGERITALSRRLEATAQEDKVAQRLITIRGVGPIIATAIVAKQTDPSR 240
            LL  L   +  L E+I  +   L+    ED+ AQRL+TI GVGP+ A+ +  +  D   
Sbjct: 177 -LLARLHTHYGYLSEQIKEIDNELKTHLNEDETAQRLLTIPGVGPVTASLLATRLGDGKN 235

Query: 241 FASGRMYSAFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSVLSQLRPDSDQPD 300
           +AS R ++A  G+VP Q+S+G K  L  +SKRG+  +RSL++Q A + + +L  +S    
Sbjct: 236 YASSRDFAASTGLVPRQYSTGGKPTLMGISKRGNKVLRSLLVQCARAFMRRLEHNSG--- 292

Query: 301 DRRLLRW----LSRLGRKEAAIRLANRNLRIIWAL 331
             RL  W    L+       A  LAN+  RI WA+
Sbjct: 293 --RLAEWVKKQLASHHSNVVACALANKLARIAWAV 325