Pairwise Alignments

Query, 352 a.a., transposase from Pseudomonas putida KT2440

Subject, 341 a.a., Transposase IS116/IS110/IS902 family protein from Alteromonas macleodii MIT1002

 Score =  179 bits (453), Expect = 1e-49
 Identities = 120/340 (35%), Positives = 183/340 (53%), Gaps = 13/340 (3%)

Query: 5   TTICVDLAKQVFQLAGEDATGRVIYEDRIKSRQAFHDFLLRLPTTVAVLMECGPGAQAWA 64
           TTI +DLAK V  +   +  G+++ +  ++  Q  H F    P  V V  E    A  WA
Sbjct: 4   TTIGLDLAKSVSHVVCCNQAGKIVRKKMLRRTQILHFFSELSPCLVGV--ESCASAHYWA 61

Query: 65  RLLQAKGNPVRILPAQRVAEHRSGAKNDRNDCYAILRAGRDTSIASIPIKSTTALAIQAL 124
           R +   G+ V+ +  Q V  +  G K D ND  AI  A     +  +  K+ T   IQAL
Sbjct: 62  REIAKYGHQVKQIAPQHVKAYVRGNKTDFNDALAIAEAVVRPEMRFVQTKTQTQQDIQAL 121

Query: 125 HRIRRGNIKRHTALGNQIRGLLLEHGVSMPQGDAAINKHVPQALE-DASLPLPDLLRELL 183
           H +R+   +  TA  N+IRGLL E+G+ +P G + + K +P+  +      L +L +ELL
Sbjct: 122 HVMRKKCERDRTANSNEIRGLLNEYGIILPVGISHVYKSLPELFDRQVENGLSELFKELL 181

Query: 184 DELLMDWLSLGERITALSRRLEATAQEDKVAQRLITIRGVGPIIATAIVAKQTDPSRFAS 243
           +      + L E +   +++++  +Q +   +RL +I GVGPIIA+A+     + S F +
Sbjct: 182 ERHYQKLVELDEHLDWYTKKIKQLSQHE-ACRRLQSIPGVGPIIASALYQHIGNGSEFKN 240

Query: 244 GRMYSAFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSVLSQLRPDSDQPDDRR 303
           GR  SA  G+VP QHSSG K  L  +SKRGD Y+R+L+I GA +V+ ++    + P    
Sbjct: 241 GRAVSASLGLVPKQHSSGGKHNLQGISKRGDSYLRTLLIHGARAVM-RVSKHKETP---- 295

Query: 304 LLRWLSRL----GRKEAAIRLANRNLRIIWALLQSDQVYQ 339
           L +W+ R+    GR +AA+ LAN+  RI WALL     YQ
Sbjct: 296 LSQWIKRIEQTRGRNKAAVALANKLARIAWALLAQGGDYQ 335