Pairwise Alignments

Query, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  305 bits (780), Expect = 4e-87
 Identities = 197/524 (37%), Positives = 299/524 (57%), Gaps = 37/524 (7%)

Query: 38  RQAGVAIEQVSVPSIKILDELTA-LNLRMRTLSYRLLLNREPATQRDTLDMLDQRNSQID 96
           R A V+++  ++ + + +D L+  +  R    S RL        Q   +    Q+  Q+ 
Sbjct: 131 RAARVSMDSSAIRADQAMDALSQEVMARPEADSVRL-------AQYQLISKARQQLLQVR 183

Query: 97  RARQAYLPMIVAADEQAAFDQYGQLL----NQYRQLESRMRTLSQ--------ADRLDEL 144
              + Y+    +A+EQAA  Q    L    N  RQL S    L Q         D + + 
Sbjct: 184 IDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQF 243

Query: 145 RDLL------NRDLLANSEQINKVMDTLVRINTDQT--RATNEKAANQYAGAFALVIGLL 196
           RD +        ++      I K  D L +I  ++    +T  ++    A   AL++G+L
Sbjct: 244 RDAVANITTSRAEMTVQGADIVKRSDALYQIQLERRDIESTQARSLQAIATLLALLVGVL 303

Query: 197 VAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAEGTDEAARLLRAMARMQ 256
            A          L+TR I +P+++ L   E++A GDLT  +R    DE   L + +ARM 
Sbjct: 304 AAV---------LITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQGIARMG 354

Query: 257 DKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMTSAVEEVA 316
             LR+ +  I    TQ+ASAAEEL+AVT++++ G   Q  E +Q ATA+ EM + V+EVA
Sbjct: 355 TTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQEVA 414

Query: 317 RNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLD 376
           RNA   S A++ A      G  +V E +G IER++ D+  + + +  L ++S+ IG V+D
Sbjct: 415 RNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSVMD 474

Query: 377 VIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQG 436
           VI+ +A+QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQ+ST EIE +I S+Q 
Sbjct: 475 VIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASLQH 534

Query: 437 GTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEEQAQVARE 496
           GT++   +M+ S    +S++ +AR AG +L++I   V+ I   N  IA+AAE+Q+ VA E
Sbjct: 535 GTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVAEE 594

Query: 497 VDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARFR 540
           + R+++N+ D+S Q+A  + +T+A+S EL+RL   L  LV++FR
Sbjct: 595 ISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFR 638