Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 315 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  261 bits (667), Expect = 2e-74
 Identities = 142/307 (46%), Positives = 194/307 (63%), Gaps = 11/307 (3%)

Query: 12  LALSSIVATPLFA--AEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQQ 69
           L L+++++ P+ A  AEPA C+ V    V WTD+  T+A    +L GLGY+ + T  S  
Sbjct: 7   LLLAAMLSLPVMAHAAEPAQCQTVNFSDVGWTDITVTTATTSEILKGLGYKPRTTMISVP 66

Query: 70  IIFAGIRD-KRLDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDK 128
           + +  + D K +D+FLG W P M   I  + DA   + + + +LE+A+ TLAVP+ LY+K
Sbjct: 67  VTYKSLADGKNMDVFLGNWMPTMENDIKQYRDAGTVETV-RANLENAKYTLAVPEALYNK 125

Query: 129 GLKTFADIHKFEKELGGKIYGIEPGSGANTQIKAMITKNQFDL--GKFQLVESSEAGMLA 186
           GLK FADI KF+ ELGGKIYGIEPG+  N  I+ +I K+ F L    F++VESSEAGML+
Sbjct: 126 GLKDFADIAKFKDELGGKIYGIEPGNDGNRTIQTLIDKDAFGLKTAGFKVVESSEAGMLS 185

Query: 187 AVDRAVRRKEAVVFFGWAPHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCP 246
            V+RA +R +A+VF GW PHPMN    M YL    D+ GP+ G+AT++T T   Y E C 
Sbjct: 186 QVERATKRDQAIVFLGWEPHPMNTRFKMKYLTGGDDSFGPNYGQATIYTNTRKGYTEECS 245

Query: 247 NALRLLANLKFSAEDESRMMQPLLDHK---DALESARQWLKDHPEDKARWLEGVTTFDGK 303
           N  +LL NL F+   ES +M  +LD K   DA  +A+ WLK +P+    WL GVTT DGK
Sbjct: 246 NVGQLLKNLVFTLNMESTLMGNVLDDKMKPDA--AAKAWLKKNPQVLDTWLAGVTTIDGK 303

Query: 304 PAADNLK 310
           P  D +K
Sbjct: 304 PGLDAVK 310