Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 304 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  215 bits (547), Expect = 1e-60
 Identities = 116/284 (40%), Positives = 174/284 (61%), Gaps = 5/284 (1%)

Query: 28  AACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQQIIFAGIRDKRLDMFLGYW 87
           A+C+ V++    W+D+ AT+A+   LL G+GY+ K  + +  I F G++D ++D+FLG W
Sbjct: 22  ASCETVKMADPGWSDIAATNAITGFLLTGMGYKPKVDTLAVPITFGGLKDGQVDVFLGNW 81

Query: 88  NPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDKGLKTFADIHKFEKELGGKI 147
            P        FV AN   V    +L+    TLAVP Y++D G+  FAD++ +  +   KI
Sbjct: 82  MPAQQGFYDKFV-ANGDVVQLAKNLDGTEFTLAVPDYVWDAGVHDFADLNHYADKFDKKI 140

Query: 148 YGIEPGSGANTQIKAMITKNQFDLGKFQLVESSEAGMLAAVDRAVRRKEAVVFFGWAPHP 207
           YGI  G+ AN  ++ +I KN F+LG+++LVESSE  MLA V RAV++++ V F GW PHP
Sbjct: 141 YGIGSGAPANISLQEIIKKNDFELGQWKLVESSEQAMLAEVSRAVKKQKFVTFLGWTPHP 200

Query: 208 MNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCPNALRLLANLKFSAEDESRMMQ 267
           MNV + M YL   +   G D G  +V+T+T   YA+ CPN  +LL NL F+ E E+ +M 
Sbjct: 201 MNVQLKMRYLKGGEKYFG-DTG--SVYTLTRKGYAQACPNVGKLLTNLSFTQEMENSIMA 257

Query: 268 PLLDHK-DALESARQWLKDHPEDKARWLEGVTTFDGKPAADNLK 310
            + ++K    ++A+ W+K +P    +WLEGV T DGK A   +K
Sbjct: 258 EVANNKVSNADAAKAWIKANPAVLDKWLEGVKTVDGKDALAAVK 301