Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 315 a.a., choline ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  223 bits (568), Expect = 5e-63
 Identities = 126/298 (42%), Positives = 171/298 (57%), Gaps = 2/298 (0%)

Query: 9   LLPLALSSIVATPLFAAEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQ 68
           L+ LA++       FA + A C  V      WTD+ AT+A++ V+L+ LGYQ K  + S 
Sbjct: 9   LVLLAVAGWFPLSSFAVDDARCATVTQSDPGWTDIAATNAISGVVLNALGYQQKVQNLSV 68

Query: 69  QIIFAGIRDKRLDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDK 128
            + F G++  ++D+FLG W P     I+ F       VL   +L  AR TLAVP Y+   
Sbjct: 69  ALAFQGLKTGQVDVFLGNWMPAQAPVISKFTADGSISVLGA-NLPAARFTLAVPDYVAAA 127

Query: 129 GLKTFADIHKFEKELGGKIYGIEPGSGANTQIKAMITKNQFDLGKFQLVESSEAGMLAAV 188
           G+K FAD+ K+  +   KIYGI PG+ AN  +K MI  + F L  + LVESSE+GMLA V
Sbjct: 128 GVKDFADLQKYANQFDHKIYGIAPGAPANQSLKKMIDAHDFALQNWSLVESSESGMLAQV 187

Query: 189 DRAVRRKEAVVFFGWAPHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCPNA 248
            RAV RK+ +VF GW PH MN    +AYL    +  G + GRATV TVT  D+A  CPN 
Sbjct: 188 TRAVERKQWIVFLGWEPHAMNTRFKLAYLSGGDNYFGANYGRATVNTVTRKDFAATCPNL 247

Query: 249 LRLLANLKFSAEDESRMMQPLLDHKD-ALESARQWLKDHPEDKARWLEGVTTFDGKPA 305
            R  + L F    E+ ++  +L+ +  A ++AR  LK  PE    WLEGVTT  G+PA
Sbjct: 248 NRFYSQLTFDVALENAVIARVLEQQQTAQDAARDELKKRPELLDSWLEGVTTRTGEPA 305