Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 324 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  256 bits (654), Expect = 5e-73
 Identities = 137/292 (46%), Positives = 183/292 (62%), Gaps = 2/292 (0%)

Query: 13  ALSSIVATPLFAAEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQQIIF 72
           A+ ++ A    AAEPA+CK VR G V WTD+ AT+A+A V LD LGY+   T +S  +++
Sbjct: 18  AVVTLGAGGALAAEPASCKAVRFGDVGWTDIAATTALASVTLDALGYKPTTTMSSVPLVY 77

Query: 73  AGIRDKRLDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDKGLKT 132
            G++ K LD+FLG W P M   + P ++    +V  + +LE A+ TLAVPKY  + GLKT
Sbjct: 78  TGMKTKSLDVFLGNWMPTMEPFVKPVLEDGSVEVT-RVNLEGAKYTLAVPKYAAEAGLKT 136

Query: 133 FADIHKFEKELGGKIYGIEPGSGANTQIKAMITKNQFDLGKFQLVESSEAGMLAAVDRAV 192
           FADI KF+ +L GKIYGIE G+  N  I  M+  + F L  F+LVESSEAGMLA V RA 
Sbjct: 137 FADIAKFKDKLSGKIYGIEAGNDGNLIIDKMLKADAFGLKDFKLVESSEAGMLAEVKRAT 196

Query: 193 RRKEAVVFFGWAPHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCPNALRLL 252
           R K  VVF GW PHPMN + ++ YL    D  GP+ G ATV T     Y   CPN  +LL
Sbjct: 197 RNKGWVVFLGWEPHPMNKSFELTYLEGGDDWFGPNLGGATVSTNVRKGYGAECPNVGKLL 256

Query: 253 ANLKFSAEDESRMMQPLLD-HKDALESARQWLKDHPEDKARWLEGVTTFDGK 303
           +NL F+   E+ +M  +++ +K    +A+ WLK +P+    WL GVTT DGK
Sbjct: 257 SNLSFTLAMENAVMDDIMNGNKKPDAAAKAWLKKNPDVLKSWLSGVTTIDGK 308