Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 317 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  251 bits (642), Expect = 1e-71
 Identities = 137/310 (44%), Positives = 187/310 (60%), Gaps = 4/310 (1%)

Query: 1   MHSLIRRSLLPLALSSIVATPLFAAEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQ 60
           +H +    +L +A  S   TPL AA+ AAC+ +RL    WTD+ AT+ +A VLLD LGY+
Sbjct: 7   LHRIAAGLILSVAAFS---TPLQAADDAACRTIRLSDPGWTDITATNGVASVLLDALGYE 63

Query: 61  TKQTSASQQIIFAGIRDKRLDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLA 120
               + S  I +  +++  +D+FLG W P     +     A   +V+ K +LE A+ TLA
Sbjct: 64  ADVKTLSVPIGYQAMKNGEIDVFLGNWMPAQKSFVDDLNAAKAAEVMTK-NLEGAKFTLA 122

Query: 121 VPKYLYDKGLKTFADIHKFEKELGGKIYGIEPGSGANTQIKAMITKNQFDLGKFQLVESS 180
           VP Y+ +KG+K FAD+ K   E   KIYGIEPG+ AN  I+ +I  N F L  +QLVES 
Sbjct: 123 VPAYMAEKGVKDFADLAKHADEFESKIYGIEPGAPANQNIQKIIDANDFGLKGWQLVESG 182

Query: 181 EAGMLAAVDRAVRRKEAVVFFGWAPHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPD 240
           E  MLA V+RA R K+AVVF  WAPHPMN  ID+AYL       GP+ G A V+T+    
Sbjct: 183 EQAMLAQVERAGRDKKAVVFLAWAPHPMNEKIDIAYLSGGDAYFGPNFGGAEVYTLARTG 242

Query: 241 YAERCPNALRLLANLKFSAEDESRMMQPLLDHKDALESARQWLKDHPEDKARWLEGVTTF 300
           + ++CPNA  L  NLKF    E+ +M  +L  +D+  +A  WLK +P+    WL+GVTT 
Sbjct: 243 WPQQCPNAATLFKNLKFDIGMENSLMGSILGGEDSKAAAAAWLKANPKALDGWLQGVTTL 302

Query: 301 DGKPAADNLK 310
           DGKP AD +K
Sbjct: 303 DGKPGADAVK 312