Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 308 a.a., ABC transporter, substrate binding protein (glycine betaine) from Agrobacterium fabrum C58

 Score =  194 bits (493), Expect = 2e-54
 Identities = 108/292 (36%), Positives = 159/292 (54%), Gaps = 4/292 (1%)

Query: 20  TPLFAAEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQQIIFAGIRDKR 79
           +P FAA+  ACK VR+    W D+  T+ +A  LL  L YQ +       +I+  ++ K 
Sbjct: 15  SPAFAADADACKMVRMAEPGWNDLAFTTGIAMTLLKSLHYQPQSQLLGIDVIYTSLKSKD 74

Query: 80  LDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDKGLKTFADIHKF 139
           LD+F+GYW+P M     P+ +    + + + +L  A+ T AVP Y+++ G+K F+D+ KF
Sbjct: 75  LDVFMGYWDPAMVNYYKPYKEDGSVEKV-RTNLVGAKYTFAVPTYVWEAGVKDFSDLQKF 133

Query: 140 EKELGGKIYGIEPGSGANTQIKAMITKNQFDLGKFQLVESSEAGMLAAVDRAVRRKEAVV 199
             +   K+YGIEPGS  N  +   +      L  +++VESSE GML+ V R  R K  +V
Sbjct: 134 ADKFDRKLYGIEPGS--NQLMLDAVKDPALGLKDWEVVESSEQGMLSQVARFNRNKTFIV 191

Query: 200 FFGWAPHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCPNALRLLANLKFSA 259
           F GWAPHPMN   D+ YL       GPD G ATV T     Y + CPN  +LL NL+F  
Sbjct: 192 FQGWAPHPMNAKFDIKYLTGGDKFYGPDFGAATVDTQVRRGYLQECPNVAKLLQNLEFDV 251

Query: 260 EDESRMMQPLLDHKDALE-SARQWLKDHPEDKARWLEGVTTFDGKPAADNLK 310
           E E++ M  +++   + E +A Q +K  P     WL+ V   DG+     +K
Sbjct: 252 EFENKGMDLIMNGGLSPEDAAAQAIKAEPHRLETWLKDVFALDGQNGLATVK 303