Pairwise Alignments

Query, 321 a.a., L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) from Pseudomonas putida KT2440

Subject, 334 a.a., 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Variovorax sp. SCN45

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 29/316 (9%)

Query: 10  FAALGSGVIGSGWVARALAH-GLDVVAWDPAPGAEQALRKRVANAWPALEKQ--GLAPGA 66
           FAA+G+G +G G +A A A+ G  +   D  P   +A ++ +  A   +E    GLA   
Sbjct: 10  FAAVGAGRMGRG-IAIAFAYAGHRISLIDLRPRGAEAWQRLLDEAKAEIEASLSGLAQLG 68

Query: 67  SQD---------RLKFV--ATIEECVRNADFIQESAPERLDLKLDLHAKISAAAKPDAII 115
             D         R+ FV  A     +  A+ + E  PE ++ K +    I+   + DAI+
Sbjct: 69  VIDAAQIERIAARVDFVDAAAAPRALAAAELVFEGVPETIEAKREAFEHINRHCRDDAIL 128

Query: 116 GSSTSGLLPSEFYESSTHPERCVVGHPFNPVYLLPLVEIVGGSRTSPEAIEAAKTIYTAL 175
            S+TS +L ++       PER +  H  NP Y++P+VE+     T    +   K +   +
Sbjct: 129 TSTTSSILVTQLAAFVRLPERFLNMHWLNPAYVIPVVELSCHPGTDAAVLARTKALMEQI 188

Query: 176 GMRPLHVRKEVPGFIADRLLEALWREALHLVNDGVATTGEIDDAIRFGAGLRWSFMGTFL 235
           G  P+ V    PG+I  RL   +  EA  ++ +G AT  EID A R+G GLR++ +G   
Sbjct: 189 GKLPV-VCGASPGYIVPRLQALVMNEAARMIEEGAATAEEIDKATRYGLGLRFAALGVVE 247

Query: 236 TYTLAGGDAGMRHFMSQFGPAL-KLPWTYLPAPELTDKLIDDVVSGTSEQQG-----ERS 289
                G D  + H   +   +L K  +T   AP +  +++++   G     G      R 
Sbjct: 248 FIDFGGCDI-LHHASREMSASLDKGRYT---APAIVGRMVEEGRLGLKSGSGFYDYEGRD 303

Query: 290 IAALERYRDDTLLAVL 305
           I A   YR D L   L
Sbjct: 304 IGA---YRRDVLSRTL 316