Pairwise Alignments

Query, 321 a.a., L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) from Pseudomonas putida KT2440

Subject, 506 a.a., 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17) from Variovorax sp. SCN45

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 11/221 (4%)

Query: 16  GVIGSGWVARALAH-----GLDVVAWDPAPGAEQALRKRVANAWPALEKQGLAPGASQD- 69
           GVIG+G + R +A      G +V+  D   GA +   + +A  W  L ++G    A +D 
Sbjct: 9   GVIGAGAMGRGIAQIAAQAGSEVLLLDSFAGAAERGLEALAAQWNKLHEKGKIDAAERDA 68

Query: 70  ---RLKFVATIEECVRNADFIQESAPERLDLKLDLHAKISAAAKPDAIIGSSTSGLLPSE 126
              R+K V  I+E +   D + E+  E L++K  L  ++       A + ++TS L  + 
Sbjct: 69  YVARVKAVDAIQE-LAGCDLVVEAVIEDLEVKRKLFRELEGVVAESATLVTNTSSLSVTA 127

Query: 127 FYESSTHPERCVVGHPFNPVYLLPLVEIVGGSRTSPEAIEAAKTIYTALGMRPLHVRKEV 186
                  PER    H FNPV L+ +VE+V G +T+ E           +G   +   ++ 
Sbjct: 128 IAAGLKRPERVAGFHFFNPVPLMKVVEVVAGFKTASEVCTQLAGYAKQMGHSAVQA-QDT 186

Query: 187 PGFIADRLLEALWREALHLVNDGVATTGEIDDAIRFGAGLR 227
           PGFI +        EAL +V++GVA    +D  ++  AG R
Sbjct: 187 PGFIVNHAGRGYGTEALRIVSEGVADFATVDRILKDQAGFR 227



 Score = 24.3 bits (51), Expect = 0.007
 Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 166 EAAKTIYTALGMRPLHVRKEVPGFIADRLLEALWREALHLVNDGVATTGEIDDAIRFGAG 225
           +AA  ++   G + + V ++  GF+  R++  +   A  +    V +  +++ A++ G G
Sbjct: 394 DAAHALFARDG-KAVSVIRDSGGFVTQRVIGTIVNIAADMCQQRVCSPADLETAVQLGLG 452