Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 367 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

 Score =  132 bits (331), Expect = 2e-35
 Identities = 92/307 (29%), Positives = 143/307 (46%), Gaps = 5/307 (1%)

Query: 19  IGFLLLDNFTLISLASAVEPLRMANQLSGREL---YRWHTLTIDGGQVWASDGLQITPDA 75
           +GF+LL NFTL + +S V+ LR+A     R       W  ++       +S G+ I P +
Sbjct: 35  VGFVLLPNFTLTAFSSFVDVLRLAGDKGDRSRPIDCSWQVMSPHLRPARSSCGIDIQPTS 94

Query: 76  AISNAPPIDTVIVCGGVGIQRSVTREHV-TWLQAQARQSRRLGAVCTGSWALACAGLLDG 134
            + +    D ++V GG+        + V  +L+  A     L  VCTGS+ L   GL+  
Sbjct: 95  DLMDPKGFDYIVVVGGLLRGVPARSDPVGEYLKRAAAAGLPLIGVCTGSFLLCRLGLMAQ 154

Query: 135 FDCSVHWECLAAMQEAFPR-VNMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELS 193
             C V W       + FP  V ++ +LF +D +R T SGG    D+   L++   G   +
Sbjct: 155 RKCCVSWYHYRDFLDEFPTLVPVADQLFVVDGDRITCSGGAGVADLAARLVTEHLGAATA 214

Query: 194 AAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVSV 253
                + + +R R  +  Q  P       +  ++   + +ME NL EP+ + ++A  + V
Sbjct: 215 QKALNILLIDRPRAAESAQPAPRLAEGTVDDARVSRALLMMEQNLAEPLAIADIADALGV 274

Query: 254 SRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYR 313
             RQLERLF   L  SP   YL LRL  AR +L  T  S   +A+  GF    HF + ++
Sbjct: 275 GVRQLERLFADRLRESPQESYLALRLRHARWMLANTRFSAARIAADLGFADGSHFGRAFK 334

Query: 314 EYFGIPP 320
             FG  P
Sbjct: 335 ARFGATP 341