Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 335 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  209 bits (531), Expect = 1e-58
 Identities = 118/319 (36%), Positives = 181/319 (56%), Gaps = 8/319 (2%)

Query: 8   NPTQNRTTPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGGQVWASD 67
           N T    +   +GFLLL++F+L +    ++    AN L   +L+   T   D G+V +  
Sbjct: 19  NETSQPASVARVGFLLLEHFSLPAFTQTLDTFVTANLLRP-DLFASRTFGCDDGEVISDL 77

Query: 68  GLQITPDAAISNAP--PIDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWA 125
           GL I PDA I  A    ++ +++CGG   +   + + +  L+  A Q   L  +  G+W 
Sbjct: 78  GLVIRPDARIDVAALQDLELLVICGGFRTELKASEDFIHLLRGAAEQGISLAGLWNGAWF 137

Query: 126 LACAGLLDGFDCSVHWECLAAMQEAFPRVNMSTRLFTLDRNRFTSSGGTAPLDMMLHLIS 185
           L  AGLL G+ C++H E   A+ E     ++++  + +DR+R T+S  +    M L  I 
Sbjct: 138 LGRAGLLQGYRCAIHPEHRPALGEVSKATHVTSEPYVIDRDRLTASSPSGAFHMALDWIK 197

Query: 186 RDHGRELSAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLD 245
             HG+ L   I ++  +E  R    ++R+     +  + P L+E+V LM+ANLEEP++LD
Sbjct: 198 GLHGKALVEGIEDILAFEESR----YRRIKPTENVSVSAP-LREVVKLMDANLEEPLELD 252

Query: 246 ELAVYVSVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVST 305
           +LAVY   SRRQLERLF++ L  +P RYY++LR+  AR+LL+ T +S +EV   CGFVS 
Sbjct: 253 QLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRVTEARRLLQHTELSQVEVLVACGFVSP 312

Query: 306 PHFSKCYREYFGIPPRDER 324
            HFSKCY  YFG  P  E+
Sbjct: 313 SHFSKCYSSYFGYRPSKEK 331