Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 324 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Variovorax sp. SCN45

 Score =  125 bits (313), Expect = 2e-33
 Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 4/312 (1%)

Query: 17  QSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGGQVWASDGLQITPDAA 76
           ++I  L +    L+ ++  ++    AN  +  + YR   +    G V +S G+++ PDA 
Sbjct: 5   KTIAILAMPGVQLLDVSGPLDVFAEANLQAKAQAYRLLVVASKRGPVRSSSGVRLMPDAT 64

Query: 77  ISNA--PPIDTVIVCGGVGIQRSVTREHVT-WLQAQARQSRRLGAVCTGSWALACAGLLD 133
           I +A   PI T++V G      + +  +V+ WL+ Q  + RR G+VC+G++ LA AGLL+
Sbjct: 65  IGDAMHEPIHTLLVAGSPHAADAASDANVSAWLKQQTPKLRRFGSVCSGAFVLAQAGLLN 124

Query: 134 GFDCSVHWECLAAMQEAFPRVNMSTRLFTLDRNRF-TSSGGTAPLDMMLHLISRDHGREL 192
           G   + HW     +   +P V +      +   R  T++G TA LD+ L L+  D GR++
Sbjct: 125 GRRVTTHWAVAEQLARDYPSVTVDADAIHVRDGRLRTAAGVTAGLDLSLALVEEDLGRDI 184

Query: 193 SAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVS 252
           +  ++   V    R     Q         T +  LQE+   + AN  +   +  LA  + 
Sbjct: 185 AMKVAAQLVMFFKRPGGQMQFSRKGEAAPTGRSALQEVQRWIAANPAQDHGVANLAARMG 244

Query: 253 VSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCY 312
           +S R   RLF++ +  +P+ +   +R+  AR+LL+    +  +VA  CGF       + +
Sbjct: 245 LSERHFARLFRQEVGVTPAAWVEDVRVTAARRLLEAGDAAPKQVAFQCGFADADTLRRAF 304

Query: 313 REYFGIPPRDER 324
           + + GI P + R
Sbjct: 305 QRHVGITPAEYR 316