Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  122 bits (307), Expect = 1e-32
 Identities = 94/319 (29%), Positives = 159/319 (49%), Gaps = 11/319 (3%)

Query: 19  IGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGGQVWASDGLQITPDAAIS 78
           IG L+   F ++ LA A+    +AN    + +Y    L+  GG V +S G  +T D+   
Sbjct: 4   IGVLVFPGFQILDLA-AIAAFELANMHLDQPVYCVEMLSETGGPVVSSSG--VTVDSKRY 60

Query: 79  NAPPIDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWALACAGLLDGFDCS 138
            A   DT+++ G + I  + + +    L++  R +RR+ ++CTG++ LA AGLLDG   +
Sbjct: 61  TAAKFDTLVMTGSLTITPT-SEKLCQILRSGRRSARRVASICTGAFGLADAGLLDGRRVT 119

Query: 139 VHWECLAAMQEAFPRVNMST-RLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSAAIS 197
            HW     +Q   P   +   R+F  D + +TS+G TA +D++L L+  D G +++  I+
Sbjct: 120 THWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLALVEEDLGVDMARLIA 179

Query: 198 E-MFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVSVSRR 256
           + + VY R    Q      L+  L     ++Q  +A   A+L E + ++ELA    +S R
Sbjct: 180 KKLVVYHRRAGGQSQFSALLE--LEPKSDRIQLALAYARAHLREGLSVEELAEVAHLSPR 237

Query: 257 QLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYREYF 316
           Q  R F+     SP++    LR+  AR L+ +  +++  VA   GF       + +    
Sbjct: 238 QFSRAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQEVGFGDPERMRRAFLRTL 297

Query: 317 GIPPRDERVGSNTAQQVAM 335
           G PP+  R     A+Q AM
Sbjct: 298 GQPPQSVR---RVARQQAM 313