Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 313 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Sphingobium sp. HT1-2

 Score =  131 bits (329), Expect = 3e-35
 Identities = 89/313 (28%), Positives = 157/313 (50%), Gaps = 4/313 (1%)

Query: 19  IGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGGQVWASDGLQITPDAAIS 78
           +  +L   F  ++L  A     +AN +     Y     ++ GG V +S G +I P   + 
Sbjct: 4   VAMVLTPGFQFLALG-AQAAFELANVVVEDAFYTLGIYSVGGGPVASSSGFEI-PTVPLG 61

Query: 79  NAPPIDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWALACAGLLDGFDCS 138
            A P+DT+++  G+        E +  LQA A  +RR+  +CTG++ LA  GLLDG   +
Sbjct: 62  EAGPVDTLLLMAGLMPPPPQDAETLAVLQATALPARRIAGLCTGAFLLAQMGLLDGRRAT 121

Query: 139 VHWECLAAMQEAFPRVNM-STRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSAAIS 197
            HW     M++ FP V +   R+F  + + +TS+G TA LD+++ ++ +D G +++ +++
Sbjct: 122 THWAYARMMRDGFPDVRVEEDRIFINEGSVWTSAGLTAGLDVVVAMVEKDLGADVARSVA 181

Query: 198 EMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVSVSRRQ 257
              V    R     Q   +   L  +  ++Q+ +    ++L+ P+ ++ELA   ++S RQ
Sbjct: 182 RRLVMHHRRAGGQSQHSEMLD-LAPSSDRIQKALVHARSHLQNPLTVEELADVAALSPRQ 240

Query: 258 LERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYREYFG 317
             R F+     SP++   +LRL  AR LL+ T  S+  VA   GF+      + +   +G
Sbjct: 241 FSRAFRAETGQSPAKAVEQLRLEAARLLLEDTRHSLEAVAREVGFIDLRRMREVFMRNYG 300

Query: 318 IPPRDERVGSNTA 330
            PP+  R    TA
Sbjct: 301 QPPQALRRLMRTA 313