Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 328 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  147 bits (372), Expect = 3e-40
 Identities = 89/325 (27%), Positives = 162/325 (49%), Gaps = 3/325 (0%)

Query: 11  QNRTTPQSIGFLLLDNFTLISLASAVEPLRMANQ-LSGRELYRWHTLTIDGGQVWASDGL 69
           Q +   +++  +L ++  L+ +   ++   +AN+ L     YR  TL      V  S GL
Sbjct: 2   QEKPAHRTVAMVLFNDVLLLDVTGPMDAFAIANRFLPAARQYRLLTLAEGQAVVRGSCGL 61

Query: 70  QITPDAAISNAPP-IDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWALAC 128
           ++  D  + + P  +D ++V GG G           WL    RQ++R GA+CTG + L  
Sbjct: 62  KVVADRRLEDLPEAVDLLLVPGGPGAYDIALPGIERWLPKAVRQAKRFGAICTGVFLLGR 121

Query: 129 AGLLDGFDCSVHWECLAAMQEAFPRVNMST-RLFTLDRNRFTSSGGTAPLDMMLHLISRD 187
           AGLL+G+ C+ HW  +  + +AFP   + T +++ +DR   TS G TA +D+ L +++ D
Sbjct: 122 AGLLNGYRCTTHWNYVERLAQAFPEAKVETEQIYVMDRCLITSGGITAGIDLALAVVAED 181

Query: 188 HGRELSAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDEL 247
           HG+ L+  ++++ +  R R        PL   +  +   +  + A +  ++E+   + ++
Sbjct: 182 HGKALALEVAKVLLVARHRQGGQTPYGPLLAAVPRDDSPIARVQAYIVDHIEQAFTVQKM 241

Query: 248 AVYVSVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPH 307
           A  V++S R   R F + +  +P +Y    R+ R R+LL+   + +  VA+ CGF S  H
Sbjct: 242 AELVAMSGRNFARTFLREVGITPLQYLQNARIDRTRKLLECGDLPMKVVAAQCGFGSDRH 301

Query: 308 FSKCYREYFGIPPRDERVGSNTAQQ 332
             K + E  G+ P   R      +Q
Sbjct: 302 MRKVFFERIGMTPAQYRAQFGGGEQ 326