Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  258 bits (659), Expect = 2e-73
 Identities = 136/313 (43%), Positives = 198/313 (63%), Gaps = 1/313 (0%)

Query: 17  QSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGGQVWASDGLQITPDAA 76
           ++I FLL+  F+ +   SAVEPLR+AN+  G +LYRW  L++DG  V AS+G+ I  DAA
Sbjct: 7   ETIAFLLVPGFSAMGFISAVEPLRVANRFGG-QLYRWQVLSLDGEAVLASNGMSINADAA 65

Query: 77  ISNAPPIDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWALACAGLLDGFD 136
           +    P + ++V  G     +V  + +  L+    ++  LG + TG+  LA AGLL+G+ 
Sbjct: 66  LGEGEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYR 125

Query: 137 CSVHWECLAAMQEAFPRVNMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSAAI 196
            ++HWE L A +E +P +  +  LF +DR+R T +GGTA +D+MLHLI++ HG EL+  +
Sbjct: 126 ATLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVKV 185

Query: 197 SEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVSVSRR 256
           SE FV  RIR  QDHQR+ +    G +  KL   +  ME ++E P+   ELA  + V+RR
Sbjct: 186 SEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTRR 245

Query: 257 QLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYREYF 316
           QLERLF+ +L  +PS +YL LRL +ARQLL QT MS+ EV+  CGF    +F++ Y+  F
Sbjct: 246 QLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLRF 305

Query: 317 GIPPRDERVGSNT 329
           G  PR+ER  S T
Sbjct: 306 GRCPREERRPSGT 318