Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 314 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  274 bits (700), Expect = 2e-78
 Identities = 155/305 (50%), Positives = 196/305 (64%), Gaps = 9/305 (2%)

Query: 11  ALLSAPLLAQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEALGYKTHTTMISVPVTYK 70
           A+LS  +LA  A+   CQ VR   V WTD+  T+A T V+L+ LGYKT  T  S  + + 
Sbjct: 16  AILSTNVLA--ADAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYKTKQTSASQQIIFA 73

Query: 71  SLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETV-RANLENAKYTLAVPQALYDKGLKD 129
            +   + LD+FLG W P M   I  + DA  V+ + + +LE+A+ TLAVP  L DKGLK 
Sbjct: 74  GIRDQR-LDLFLGYWNPLMTQTITPFVDAKQVKVLDKPSLEDARATLAVPTYLADKGLKT 132

Query: 130 FSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEAGMLSQVDR 189
           F+DI KF+KEL GKIYGIEPG+  N  I++MI KN FGL    F++V+SSEAGML+ VDR
Sbjct: 133 FADIAKFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGL--GKFQLVESSEAGMLAAVDR 190

Query: 190 AQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQECSNVGQ 249
           A +R EA+VF GW PHPMN    M YLTG DD  GP+ G ATV + T   Y ++C NV +
Sbjct: 191 AVRRKEAVVFFGWAPHPMNVNVAMTYLTGSDDALGPNEGMATVWSVTAPNYAEQCPNVHK 250

Query: 250 LLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTTVDGKPGLEAV 309
           LL NL+F   DES MM  +LD K   E +AK+W+KD+P     WL GVTT DGKP   A 
Sbjct: 251 LLTNLTFTAADESRMMQPLLDHKDAIE-SAKQWLKDHPQDQARWLEGVTTFDGKPA--AA 307

Query: 310 KAKLT 314
             KLT
Sbjct: 308 NLKLT 312