Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  268 bits (685), Expect = 1e-76
 Identities = 144/310 (46%), Positives = 192/310 (61%), Gaps = 8/310 (2%)

Query: 8   LLVALLSAPLL---AQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEALGYKTHTTMIS 64
           LL+ L +A LL   A AAEP  C+ +R   V WTD+  T+    V+L  LGY +  T   
Sbjct: 4   LLLTLTAAALLSAHAMAAEPASCKNIRMGVVSWTDVVATSGMADVLLNGLGYDSKQTSAV 63

Query: 65  VPVTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRA-NLENAKYTLAVPQALY 123
             + +  +   K LD+FLG W P M+N+I  +  A  V+     +L +A+ TLAVPQ + 
Sbjct: 64  QQIIFAGIRD-KRLDIFLGYWKPAMDNNIAPFLAAKQVKVFDTPSLADAQATLAVPQYVA 122

Query: 124 DKGLKDFSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEAGM 183
           D GLK F+DI +FK +L GKIYGIEPG+  N  IQ MID N FGL   GFK+V S EAGM
Sbjct: 123 DAGLKTFADIARFKDKLGGKIYGIEPGSGANTDIQKMIDTNRFGL--GGFKLVASGEAGM 180

Query: 184 LSQVDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQE 243
           L+ V RA  R E +VF+GW PHPMN   KM YLTG +D FGPD G+ATV T T   + Q 
Sbjct: 181 LAAVQRAVNRKEFVVFVGWTPHPMNINMKMAYLTGSEDVFGPDEGRATVSTVTAPDFAQR 240

Query: 244 CSNVGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTTVDGK 303
           C N  ++L+NL+F    ES +M  ++ ++  P+  A++W++D+P  L  WLAGVT  DG 
Sbjct: 241 CPNANRVLENLTFTAAQESQLMVPIM-ERESPQDVARQWLRDHPEDLQRWLAGVTAFDGT 299

Query: 304 PGLEAVKAKL 313
            G+ AV+A L
Sbjct: 300 DGVAAVQASL 309